DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9962 and vrk3

DIOPT Version :10

Sequence 1:NP_608697.1 Gene:CG9962 / 33448 FlyBaseID:FBgn0031441 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001013586.2 Gene:vrk3 / 541443 ZFINID:ZDB-GENE-030131-246 Length:512 Species:Danio rerio


Alignment Length:288 Identity:81/288 - (28%)
Similarity:127/288 - (44%) Gaps:52/288 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ELETMLRINSIMVIRKLGSGSFGDIYEAKHMGSGLHVALKVERKNA----GQSH----LSIESTV 61
            |.:.|||:.:     |.|           |:.:..:..|:..:.:|    |:.|    |.|.|.|
Zfish   246 ECKYMLRLGA-----KEG-----------HLFNEQNFHLRAAKPDAVEKWGKLHKLDFLGIPSCV 294

  Fly    62 YNLLRHGMGIPMTYQFFSNRRHDVLVMELLGPSLETLFTMCNRRFSMKTVLMLADQMVDRLEYLH 126
                  |.|:..||:|        ||...:|..|:|.........|.|.||.||.:::|.||::|
Zfish   295 ------GFGLHETYRF--------LVFPCMGQPLQTELDEGTGSLSEKNVLQLALRLLDSLEFIH 345

  Fly   127 LHHYVHRDIKPENFLMGVGLTRH-RLHLIDFGLSKRYWDMKENRHVPQRRGTKWA--GTARYASV 188
            ...|.|.||...|..  :..:.| .:.|..||.:.|:  ....:||..|:|::.|  |...:.|:
Zfish   346 EKEYAHADIHAGNIY--IKSSSHTEVFLSGFGHAFRF--CPGGKHVEYRQGSRTAHQGNISFISL 406

  Fly   189 NALCCKVQSRRDDLESVGYVLIYLLRGSLPWQGLLPNSKLQKAEMILEMKLSTLPNSLCAGYPNE 253
            ::......|||.||:|:||.::..:.|||||..|..||....||.  |..:|.:|..|...|..:
Zfish   407 DSHKGAGPSRRSDLQSLGYCMLCWMTGSLPWSHLSHNSSSVAAEK--ERYMSDVPGLLTYCYKQK 469

  Fly   254 -----FYNYIIYTRQLGFEEEPDYRMIR 276
                 ...|:.....|.:.|:|||.:::
Zfish   470 KASSALQEYLCNVMALQYTEKPDYTLLK 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9962NP_608697.1 STKc_CK1 17..279 CDD:270918 77/276 (28%)
vrk3NP_001013586.2 DZR 5..>28 CDD:432773
PK_VRK3 207..504 CDD:271026 81/288 (28%)
Blue background indicates that the domain is not in the aligned region.

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