DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9962 and Vrk3

DIOPT Version :10

Sequence 1:NP_608697.1 Gene:CG9962 / 33448 FlyBaseID:FBgn0031441 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_001005561.2 Gene:Vrk3 / 361565 RGDID:1549692 Length:462 Species:Rattus norvegicus


Alignment Length:233 Identity:69/233 - (29%)
Similarity:109/233 - (46%) Gaps:30/233 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GMGIPM-TYQFFSNRRHDVLVMELLGPSLET-LFTMCNRRFSMKTVLMLADQMVDRLEYLHLHHY 130
            |.|:.. .|:|        ||...||.||:: |........|.:.:|.:|.:::|.|||||.|.|
  Rat   234 GFGVHQDKYRF--------LVFPSLGRSLQSALDDNPKHVVSERCMLQVACRLLDALEYLHEHEY 290

  Fly   131 VHRDIKPEN-FLMGVGLTRHRLHLIDFGLSKRYWDMKENRHVPQRRGTK--WAGTARYASVNALC 192
            ||.::..|| |:....|:  ::.|:.:|.:.||  ....:||..:.|::  ..|...:.|::...
  Rat   291 VHGNLTTENVFVNPEDLS--QVTLVGYGFTYRY--CPGGKHVAYKEGSRSLHDGDLEFISMDVHK 351

  Fly   193 CKVQSRRDDLESVGYVLIYLLRGSLPWQGLLPNSKLQKAEMILEMKLSTLPN-----SLCAGY-- 250
            ....|||.||:::||.::..|.|||||...|||:     |.|.:.|.....|     .||..:  
  Rat   352 GCGPSRRSDLQTLGYCMLKWLYGSLPWTNCLPNT-----EEITKQKQKYQDNPEPLVGLCGRWNK 411

  Fly   251 -PNEFYNYIIYTRQLGFEEEPDYRMIRCTFLSLLFNLK 287
             ......|:.....|.:||:|.|..:|.....||.|::
  Rat   412 TSETLREYLKVVMALDYEEKPPYATLRNNLEVLLQNMR 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9962NP_608697.1 STKc_CK1 17..279 CDD:270918 66/223 (30%)
Vrk3NP_001005561.2 zinc_ribbon_2 13..32 CDD:433054
Protein Kinases, catalytic domain 143..445 CDD:473864 66/227 (29%)
Blue background indicates that the domain is not in the aligned region.

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