DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arpc5 and AT5G65274

DIOPT Version :9

Sequence 1:NP_001259945.1 Gene:Arpc5 / 33444 FlyBaseID:FBgn0031437 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001119503.1 Gene:AT5G65274 / 6240785 AraportID:AT5G65274 Length:135 Species:Arabidopsis thaliana


Alignment Length:128 Identity:43/128 - (33%)
Similarity:67/128 - (52%) Gaps:5/128 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 FREDDGVESAAAGPD--ESEITTLLTQGKSVEALLSALQNAPLRCKNQNVKDHALNITLRVLLSI 85
            |.|.|..|...|..:  ..:|.:||...|.||||.:||..:|.:..::..|.....:..|.:::|
plant     7 FVEADNAEEIMARIETKSQKIESLLKHYKHVEALKTALDGSPPKTLDERCKSANWIVVHRAIMAI 71

  Fly    86 KSTQMDQAIDTLDQNDLIDVLMKYIYRGFEIPSEGSSGHLLQWHEKAFAKGGVGCIVRVLSDT 148
            |  .::..:::|.. :..|:||||:|||.....|.:....|..|||...:.|:|||:|.||||
plant    72 K--DIEGMLNSLTA-EYYDILMKYLYRGLSTGDEPTCEQCLMIHEKLTERAGLGCILRCLSDT 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arpc5NP_001259945.1 P16-Arc 9..147 CDD:282544 40/125 (32%)
AT5G65274NP_001119503.1 P16-Arc 8..130 CDD:368064 39/124 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3402
eggNOG 1 0.900 - - E1_KOG3380
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I2460
OMA 1 1.010 - - QHG55328
OrthoDB 1 1.010 - - D1565115at2759
OrthoFinder 1 1.000 - - FOG0001504
OrthoInspector 1 1.000 - - otm3317
orthoMCL 1 0.900 - - OOG6_102485
Panther 1 1.100 - - O PTHR12644
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.840

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