DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-B17.2 and AT3G03100

DIOPT Version :9

Sequence 1:NP_001137770.1 Gene:ND-B17.2 / 33443 FlyBaseID:FBgn0031436 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_001030628.1 Gene:AT3G03100 / 821104 AraportID:AT3G03100 Length:159 Species:Arabidopsis thaliana


Alignment Length:149 Identity:51/149 - (34%)
Similarity:77/149 - (51%) Gaps:42/149 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QMVREAGGLKQAYLKLYRNDDL------KIG-TLVGIDKYGNKYFEN-PYYFYGRNRWIEFAPHV 71
            :|:||.|     :::...:.:|      .|| ||||:||:||||::. ....||.:||:|:|   
plant    23 RMIREEG-----FMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQKLGDTQYGMHRWVEYA--- 79

  Fly    72 NMD-YDGSMIPAEWYGWMHYKTD--------LPPIRDGCRPKYKWIADHSENLSGTKEAYYPYST 127
            :.| |:.|.:||||:||:|:.||        |.|.|.|        .:|.||.||..:||..:|.
plant    80 SKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYG--------LEHKENFSGEGDAYIYHSK 136

  Fly   128 --TPN-------KVEAWEP 137
              |.|       :.::|.|
plant   137 GHTLNPGQKNWTRYQSWVP 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-B17.2NP_001137770.1 NDUFA12 40..135 CDD:282872 42/113 (37%)
AT3G03100NP_001030628.1 PLN02732 1..159 CDD:215389 51/149 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 72 1.000 Domainoid score I3340
eggNOG 1 0.900 - - E1_KOG3382
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 72 1.000 Inparanoid score I2450
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1475919at2759
OrthoFinder 1 1.000 - - FOG0006276
OrthoInspector 1 1.000 - - oto2840
orthoMCL 1 0.900 - - OOG6_103702
Panther 1 1.100 - - LDO PTHR12910
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4563
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.830

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