Protein Alignment Rad1 and AT4G17760

DIOPT Version :9

• Sequence 1: NP_477440.1
• Gene: Rad1 / 33440
• FlyBaseID: FBgn0026778
• Length: 274
• Species: Drosophila melanogaster
• Sequence 2: NP_193511.2
• Gene: AT4G17760 / 827497
• AraportID: AT4G17760
• Length: 300
• Species: Arabidopsis thaliana
• Alignment Length: 302
• Identity: 64/302 - (21%)
• Similarity: 129/302 - (42%)
• Gaps: 51/302 - (16%)

  Fly     4 VEP-SPYGDCKFVARVEHIKTFIQAIKSICFNDY--GMVQVSEDGLRITVEQGKSIQATLFMPPG 65
            :|| :|    ..:.::::::..:.|:..:.:..:  .:|::||.|:.:.||:...:||.:::...
plant     9 IEPDTP----DLICQLDNVQGMVDALTCVRWKRHQDALVELSEHGIVLIVEESGCLQAKVYLQRE 69

  Fly    66 AF--MEFRVQDFQCFGVKMNVLSECLSLFGSADCSLRMMYRDKGDPLKIILYPHDDDDVSTECAI 128
            .|  .|:..|....||:.:.:|.:||:.|.|...|..:..:..|..::::|...|..:......|
plant    70 LFTKYEYGAQGRPRFGISLGLLVDCLNTFSSPGHSNTIEIKYPGPDMELLLKSVDTLNSCIYSEI 134

  Fly   129 KTMDCDEPIDYDQNLKDPDLN--VIFVRGPNLSKVFNELE--KSAEEFEFVTSPNRPHFKITTVG 189
            :|. ..|.:.:|.|.:...:.  ...|:...|.:..::||  .|:.:......|....|:....|
plant   135 RTR-IPETVTWDYNFEQAGIAPLTFTVKSAALKEAIDDLEWPGSSVQISLQKEPPCVIFRGEGHG 198

  Fly   190 IMQAVFSVEVAKTSPMMMMFNCKQTVVARYKSQQIRMTNKAMQSATKVAIKTNSV---------- 244
            .:|..| :..|.|. :::.|:|...|...||.:.::        ||...|..|.|
plant   199 DLQIDF-MYYANTD-LLLAFHCDTEVSYGYKYKFLK--------ATTANIPGNVVRENRGSKLTI 253

  Fly   245 ---GLLEL-HLVMQGDS---QEE----------IFIQFFIIP 269
               |:|:: |||....:   |.|          .:|:||:.|
plant   254 GRGGMLKVQHLVSVSKALAPQVESAGYQPPSRIAYIEFFVKP 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad1	NP_477440.1	PCNA	13..272	CDD:238322	61/292 (21%)
		Rad1	13..253	CDD:280331	54/261 (21%)
AT4G17760	NP_193511.2	PCNA	17..276	CDD:238322	56/269 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	45	1.000	Domainoid score	I4657
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	45	1.000	Inparanoid score	I2669
OMA	1	1.010	-	-		QHG59914
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004120
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_103936
Panther	1	1.100	-	-	LDO	PTHR10870
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	8	7.930