Sequence 1: | NP_477440.1 | Gene: | Rad1 / 33440 | FlyBaseID: | FBgn0026778 | Length: | 274 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001099889.1 | Gene: | Rad1 / 294800 | RGDID: | 1306496 | Length: | 280 | Species: | Rattus norvegicus |
Alignment Length: | 279 | Identity: | 76/279 - (27%) |
---|---|---|---|
Similarity: | 153/279 - (54%) | Gaps: | 19/279 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MTDVEPSPYGDCKFVARVEHIKTFIQAIKSICFNDYGMVQVSEDGLRITVEQGKSIQATLFMPPG 65
Fly 66 AFMEFRVQDFQ-CFGVKMNVLSECLSLFGSAD-----CSLRMMYRDKGDPLKIILYPHDDDDVST 124
Fly 125 ECAIKTMDCDEPIDYD---QNLKDPDLNVIFVRGPNLSKVFNELEKSAEEFEFVTSPNRPHFKIT 186
Fly 187 TVGIMQAVFS-VEVAKTSPMMMMFNCKQTVVARYKSQQIRMTNKAMQSATKVAIKTNSVGLLELH 250
Fly 251 LVMQGDSQEEIFIQFFIIP 269 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rad1 | NP_477440.1 | PCNA | 13..272 | CDD:238322 | 74/267 (28%) |
Rad1 | 13..253 | CDD:280331 | 72/249 (29%) | ||
Rad1 | NP_001099889.1 | Rad1 | 17..257 | CDD:396631 | 72/249 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166353621 | |
Domainoid | 1 | 1.000 | 124 | 1.000 | Domainoid score | I5433 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3194 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H37695 | |
Inparanoid | 1 | 1.050 | 134 | 1.000 | Inparanoid score | I4497 |
OMA | 1 | 1.010 | - | - | QHG59914 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0004120 | |
OrthoInspector | 1 | 1.000 | - | - | oto95804 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103936 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10870 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
14 | 13.760 |