Protein Alignment Rad1 and mrt-2

DIOPT Version :9

• Sequence 1: NP_477440.1
• Gene: Rad1 / 33440
• FlyBaseID: FBgn0026778
• Length: 274
• Species: Drosophila melanogaster
• Sequence 2: NP_499521.1
• Gene: mrt-2 / 176608
• WormBaseID: WBGene00003417
• Length: 267
• Species: Caenorhabditis elegans
• Alignment Length: 266
• Identity: 60/266 - (22%)
• Similarity: 120/266 - (45%)
• Gaps: 16/266 - (6%)

  Fly    10 GDCKFV-ARVEHIKTFIQAIKSICFNDYGMVQVSEDGLRITVEQGKSIQATLFMPPGAFMEFRVQ 73
            |.|..: .:.|::|...|..|::.|.|.|....||.|::|||:.|....|::|:.|..|..|:|:
 Worm     7 GQCTIMELKKENVKELAQVFKTVAFKDTGTWHASEAGMKITVDDGSYQLASVFINPAFFSSFKVR 71

  Fly    74 DFQCFGVKMNV--LSECLSLFGSADCSLRMMYRDKGDPLKIILYPHDDDDVSTECAIKTMDCDEP 136
            : :...:|:::  :||.||:..::..|:::.|.....|:|:::  .|.|.........|...|:.
 Worm    72 E-EIVSMKISIKSISEFLSISENSSSSVKVSYPGMFQPVKMLV--EDADGWVARGNFTTTLADQE 133

  Fly   137 IDYDQNLKDPDLNVI---FVRGPNLSKVFNELEKSAEEFEFVTSPNRPHFKITTVGIMQAVFSVE 198
            :|::.:    |..|:   .::...|.::..:.:.::.......:.|...|  ||.|.:... :|.
 Worm   134 LDFEFD----DAGVLATYLLKTQVLKEIIKDFDDTSRTVRIQFTKNSLCF--TTFGDVGET-TVS 191

  Fly   199 VAKTSPMMMMFNCKQTVVARYKSQQIRMTNKAMQSATKVAIKTNSVGLLELHLVMQGDSQEEIFI 263
            :...|..|....|.:.|...|....|:....|...|||:.::.:..|:|.....:........:|
 Worm   192 IPSRSLQMESVKCLEEVEFSYLLSLIQRMTTAFILATKLILRVDERGVLSCQFSIDHGEGNASYI 256

  Fly   264 QFFIIP 269
            :|..:|
 Worm   257 EFLTVP 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad1	NP_477440.1	PCNA	13..272	CDD:238322	58/263 (22%)
		Rad1	13..253	CDD:280331	55/245 (22%)
mrt-2	NP_499521.1	Rad1	11..246	CDD:307997	55/244 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160167127
Domainoid	1	1.000	64	1.000	Domainoid score	I6764
eggNOG	1	0.900	-	-		E1_KOG3194
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H37695
Inparanoid	1	1.050	70	1.000	Inparanoid score	I3919
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG59914
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0004120
OrthoInspector	1	1.000	-	-		oto20696
orthoMCL	1	0.900	-	-		OOG6_103936
Panther	1	1.100	-	-	LDO	PTHR10870
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1057
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	15	14.790