Protein Alignment Rad1 and mrt-2

DIOPT Version :10

• Sequence 1: NP_477440.1
• Gene: Rad1 / 33440
• FlyBaseID: FBgn0026778
• Length: 274
• Species: Drosophila melanogaster
• Sequence 2: NP_499521.1
• Gene: mrt-2 / 176608
• WormBaseID: WBGene00003417
• Length: 267
• Species: Caenorhabditis elegans
• Alignment Length: 266
• Identity: 60/266 - (22%)
• Similarity: 120/266 - (45%)
• Gaps: 16/266 - (6%)

  Fly    10 GDCKFV-ARVEHIKTFIQAIKSICFNDYGMVQVSEDGLRITVEQGKSIQATLFMPPGAFMEFRVQ 73
            |.|..: .:.|::|...|..|::.|.|.|....||.|::|||:.|....|::|:.|..|..|:|:
 Worm     7 GQCTIMELKKENVKELAQVFKTVAFKDTGTWHASEAGMKITVDDGSYQLASVFINPAFFSSFKVR 71

  Fly    74 DFQCFGVKMNV--LSECLSLFGSADCSLRMMYRDKGDPLKIILYPHDDDDVSTECAIKTMDCDEP 136
            : :...:|:::  :||.||:..::..|:::.|.....|:|:::  .|.|.........|...|:.
 Worm    72 E-EIVSMKISIKSISEFLSISENSSSSVKVSYPGMFQPVKMLV--EDADGWVARGNFTTTLADQE 133

  Fly   137 IDYDQNLKDPDLNVI---FVRGPNLSKVFNELEKSAEEFEFVTSPNRPHFKITTVGIMQAVFSVE 198
            :|::.:    |..|:   .::...|.::..:.:.::.......:.|...|  ||.|.:... :|.
 Worm   134 LDFEFD----DAGVLATYLLKTQVLKEIIKDFDDTSRTVRIQFTKNSLCF--TTFGDVGET-TVS 191

  Fly   199 VAKTSPMMMMFNCKQTVVARYKSQQIRMTNKAMQSATKVAIKTNSVGLLELHLVMQGDSQEEIFI 263
            :...|..|....|.:.|...|....|:....|...|||:.::.:..|:|.....:........:|
 Worm   192 IPSRSLQMESVKCLEEVEFSYLLSLIQRMTTAFILATKLILRVDERGVLSCQFSIDHGEGNASYI 256

  Fly   264 QFFIIP 269
            :|..:|
 Worm   257 EFLTVP 262

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad1	NP_477440.1	Rad1	14..253	CDD:396631	55/244 (23%)
mrt-2	NP_499521.1	Rad1	15..246	CDD:396631	55/240 (23%)