DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp309a2 and Cyp4f1

DIOPT Version :9

Sequence 1:NP_608689.2 Gene:Cyp309a2 / 33439 FlyBaseID:FBgn0041337 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_062569.2 Gene:Cyp4f1 / 56266 RGDID:70926 Length:524 Species:Rattus norvegicus


Alignment Length:496 Identity:114/496 - (22%)
Similarity:206/496 - (41%) Gaps:89/496 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GLVT-----ARPLT-LLGTYPGLLTRKSNLVFDVQKIYDKYKGKHRAVGVFVTRQPQILVLDPEL 123
            |:||     .:.|| |:||||                    :|....:|..|   |.|.:...::
  Rat    65 GMVTPTEQGLKELTRLVGTYP--------------------QGFLMWIGPMV---PVITLCHSDI 106

  Fly   124 AHEVL-VSNFRCYKDSLQSSYLRHAKWDKYARLNPFW-------ASGQSWRRLRTDAQAGISGSR 180
            ...:| .|.....||.:           .|..|.| |       ::|..|.|.|.........:.
  Rat   107 VRSILNASAAVALKDVI-----------FYTILKP-WLGDGLLVSAGDKWSRHRRMLTPAFHFNI 159

  Fly   181 LRQAYNIWEQGGQMLTEYMTQQVAEKNNILETRDLCFRYTAHVMADFIWGIDAGTLTRPMEQPNK 245
            |:....|:.....::.....:.::|.::.|:..:.....|...:...::..|:....:..|....
  Rat   160 LKPYVKIFNDSTNIMHAKWKRLISEGSSRLDMFEHVSLMTLDSLQKCVFSFDSNCQEKSSEYIAA 224

  Fly   246 VQEM----ASKWTSYAFYMLTLFMATIVAPCSRLLLRFRFYPKETDEFFSNLTKE--------SI 298
            :.|:    |.:......:|..|:..|   |..   :||........||...:.:|        .:
  Rat   225 ILELSALVAKRHQQPLLFMDLLYNLT---PDG---MRFHKACNLVHEFTDAVIRERRRTLPDQGL 283

  Fly   299 ELRLKAGDSTRT-DYLSHLLQLRDQ--KQATHDDLVGHALTVMLDGYDTSGTALLHALYYLAENP 360
            :..||:...::| |::..||..:|:  |:.:.:|:...|.|.|.:|:||:.:.|...||.||::|
  Rat   284 DEFLKSKAKSKTLDFIDVLLLTKDEDGKELSDEDIRAEADTFMFEGHDTTASGLSWILYNLAKHP 348

  Fly   361 AVQQKLRVEILSCMASE--KSLDFEKLSSLQYLEQVIYESLRLSSLIPQYTKVCTLPTVIRLSES 423
            ..|::.|.|:...:...  :.::::.|:.|.:|...|.|||||...:...::.||..  |.|.:.
  Rat   349 EYQERCRQEVQELLRDRDPEEIEWDDLAQLPFLTMCIKESLRLHPPVTVISRCCTQD--ILLPDG 411

  Fly   424 KSLDVEVGMTIMIPNYQFHHDKQYFPEPEAFKPERFDNGAYQELMRKG---IFLPFSDGPRICMG 485
            ::  :..|:..:|..:..||:...:|:||.:.|.|||    .|.::..   .|:|||.|||.|:|
  Rat   412 RT--IPKGIICLISIFGIHHNPSVWPDPEVYNPFRFD----PENIKDSSPLAFIPFSAGPRNCIG 470

  Fly   486 VPLAMLTLKSALVHILSNFQVV------RGRDRLIPKGDSG 520
            ...||..:|.||...|..|:::      |.:..||.:.:.|
  Rat   471 QTFAMSEMKVALALTLLRFRLLPDDKEPRRQPELILRAEGG 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp309a2NP_608689.2 p450 70..526 CDD:299894 111/486 (23%)
Cyp4f1NP_062569.2 CYP4F 74..515 CDD:410772 111/487 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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