DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp309a2 and Cyp4a1

DIOPT Version :10

Sequence 1:NP_608689.2 Gene:Cyp309a2 / 33439 FlyBaseID:FBgn0041337 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_787031.1 Gene:Cyp4a1 / 50549 RGDID:68945 Length:509 Species:Rattus norvegicus


Alignment Length:581 Identity:130/581 - (22%)
Similarity:209/581 - (35%) Gaps:155/581 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TRAKGACSNTKRGNMYILASLALILLHLLVLPIYLYLTW------------------HHKYWRKR 64
            ||..|:.|    |.:.:.:.|.|:||.:..:..||...|                  |.::...:
  Rat     9 TRFTGSIS----GFLQVASVLGLLLLLVKAVQFYLQRQWLLKAFQQFPSPPFHWFFGHKQFQGDK 69

  Fly    65 GLVTARPLTLLGTYPGLLTRKSNLVFDVQKIYDKYKGKHRAVGVFVTRQPQILVLDPELAHEVLV 129
            .|  .:.:|.:..:|....|    .|...|.|                   ::|.||:....:|.
  Rat    70 EL--QQIMTCVENFPSAFPR----WFWGSKAY-------------------LIVYDPDYMKVILG 109

  Fly   130 SNFRCYKDSLQSSYLRHAKWDKYARLNPFWASGQSW---RRLRTDA--------QAGISGSRLRQ 183
            .:    .......|...|.|..|..|   ..:||.|   ||:.|.|        ........:|.
  Rat   110 RS----DPKANGVYRLLAPWIGYGLL---LLNGQPWFQHRRMLTPAFHYDILKPYVKNMADSIRL 167

  Fly   184 AYNIWEQ-GGQMLTEYMTQQVAEKNNILETRDLC-FRYTAHVMAD-----FIWGIDAGTLTRPME 241
            ..:.||| .||..:..:.|.::...  |:|...| |.:...|..|     :|..|  |.|.    
  Rat   168 MLDKWEQLAGQDSSIEIFQHISLMT--LDTVMKCAFSHNGSVQVDGNYKSYIQAI--GNLN---- 224

  Fly   242 QPNKVQEMASKWTSYAFYMLTLFMATIVAPCSRLLLRFRFYPKETDEFFSN-------------- 292
                                .||.:.:         |..|:..:|...||:              
  Rat   225 --------------------DLFHSRV---------RNIFHQNDTIYNFSSNGHLFNRACQLAHD 260

  Fly   293 -------LTKESIELRLKAGD------STRTDYLSHLL--QLRDQKQATHDDLVGHALTVMLDGY 342
                   |.|:.::   .||:      ..|.|:|..||  ::.:....:..||.....|.|.:|:
  Rat   261 HTDGVIKLRKDQLQ---NAGELEKVKKKRRLDFLDILLLARMENGDSLSDKDLRAEVDTFMFEGH 322

  Fly   343 DTSGTALLHALYYLAENPAVQQKLRVEILSCMASEKSLDFEKLSSLQYLEQVIYESLRLSSLIPQ 407
            ||:.:.:....|.||.:|..||:.|.|:.|.:....|:.::.|..:.|....|.|:|||...:|.
  Rat   323 DTTASGVSWIFYALATHPEHQQRCREEVQSVLGDGSSITWDHLDQIPYTTMCIKEALRLYPPVPG 387

  Fly   408 YTKVCTLPTVIRLSESKSLDVEVGMTIMIPNYQFHHDKQYFPEPEAFKPERFDNGAYQELMRKGI 472
            ..:  .|.|.:...:.:||...:.:|:.|  |..||:.:.:|.||.|.|.||   |.........
  Rat   388 IVR--ELSTSVTFPDGRSLPKGIQVTLSI--YGLHHNPKVWPNPEVFDPSRF---APDSPRHSHS 445

  Fly   473 FLPFSDGPRICMGVPLAMLTLKSALVHILSNFQVVRG-------RDRLIPKGDSGFGVVLQ 526
            |||||.|.|.|:|...||..:|..:...|..|:::..       ..||:.|..:|..:.|:
  Rat   446 FLPFSGGARNCIGKQFAMSEMKVIVALTLLRFELLPDPTKVPIPLPRLVLKSKNGIYLYLK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp309a2NP_608689.2 CYP6-like 101..526 CDD:410679 109/478 (23%)
Cyp4a1NP_787031.1 CYP4B-like 71..504 CDD:410771 116/511 (23%)

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