DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp309a2 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_608689.2 Gene:Cyp309a2 / 33439 FlyBaseID:FBgn0041337 Length:538 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:553 Identity:129/553 - (23%)
Similarity:222/553 - (40%) Gaps:135/553 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 LVLPIYLYLTWHHKYWRKRGLV--TARPLTLLGTYPGLLTRKSNLVFDVQKIYDKYKGKH-RAVG 107
            :::.|:..|..:.:.|::...:  .||...|:|  ..|..:.:|..|..|.||...:.:| ..:.
Mouse    29 ILISIFPMLVSYARKWQQMRSIPSVARAYPLVG--HALYMKPNNAEFFQQLIYYTEEFRHLPIIK 91

  Fly   108 VFVTRQPQILVLDPELAHEVLVSNFRCYKDSLQSSYLRHAKWDKYARLNPFW-------ASGQSW 165
            :::...|.:.:...|....:|.|:     ..:..|:|       |..|.| |       ::|..|
Mouse    92 LWIGPVPLVALYKAENVEVILTSS-----KQIDKSFL-------YKFLQP-WLGLGLLTSTGSKW 143

  Fly   166 RRLR------------------TDAQAGISGSRL-----RQAYNIWEQGGQMLTEYMTQQVAEKN 207
            |..|                  .:.||.|..::|     ::|:|.:........:.:.:....||
Mouse   144 RTRRKMLTPTFHFTILENFLDVMNEQANILVNKLEKHVNQEAFNCFFYITLCALDIICETAMGKN 208

  Fly   208 -NILETRDLCFRYTAHVMADFIWGIDAGTLTRPMEQPNKVQEMASKWTSYAFYMLTL-------- 263
             ......|..:..|.:.|:|.|:        |.|:.|         |..:..:.|..        
Mouse   209 IGAQSNNDSEYVRTVYRMSDMIY--------RRMKMP---------WLWFDLWYLVFKEGRDHKR 256

  Fly   264 -------FMATIVAPCSRLLLRFRFYPKETDEFFSNLTKESIELRLKAGDSTRTDYLSHLLQLRD 321
                   |...::|.        |...::.:|.::...:..|..:.|     |..:|..||.:.|
Mouse   257 GLKCLHTFTNNVIAE--------RVKERKAEEDWTGAGRGPIPSKNK-----RKAFLDLLLSVTD 308

  Fly   322 QK--QATHDDLVGHALTVMLDGYDTSGTALLHALYYLAENPAVQQKLRVEILSCMA-SEKSLDFE 383
            ::  :.:.:|:.....|.|.:|:||:..|:..:||.|..||.||:|:..|:..... |.:.:..|
Mouse   309 EEGNRLSQEDIREEVDTFMFEGHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFGRSHRPVTLE 373

  Fly   384 KLSSLQYLEQVIYESLRLSSLIPQYTKVCTLPTVIRLSESKSLDVEVG--------MTIMIPNYQ 440
            .|..|:||:.||.|:||:            .|:|...:.|.|.|.|||        ..|:|| |.
Mouse   374 DLKKLKYLDCVIKETLRV------------FPSVPLFARSLSEDCEVGGYKVTKGTEAIIIP-YA 425

  Fly   441 FHHDKQYFPEPEAFKPERF----DNGAYQELMRKGIFLPFSDGPRICMGVPLAMLTLKSALVHIL 501
            .|.|.:|||:||.|:||||    ..|.:..     .::|||.|||.|:|...|::..|:.|..||
Mouse   426 LHRDPRYFPDPEEFRPERFFPENSQGRHPY-----AYVPFSAGPRNCIGQKFAVMEEKTILACIL 485

  Fly   502 SNFQVVRGRDR--------LIPKGDSGFGVVLQ 526
            ..|.|...:.|        ||.:.::|..:.|:
Mouse   486 RQFWVESNQKREELGLAGDLILRPNNGIWIKLK 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp309a2NP_608689.2 p450 70..526 CDD:299894 124/525 (24%)
Cyp4v3NP_598730.1 p450 51..517 CDD:278495 125/528 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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