DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp309a2 and cyp3a4.1

DIOPT Version :9

Sequence 1:NP_608689.2 Gene:Cyp309a2 / 33439 FlyBaseID:FBgn0041337 Length:538 Species:Drosophila melanogaster
Sequence 2:XP_002943949.2 Gene:cyp3a4.1 / 100494419 XenbaseID:XB-GENE-984218 Length:504 Species:Xenopus tropicalis


Alignment Length:520 Identity:148/520 - (28%)
Similarity:237/520 - (45%) Gaps:82/520 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 ILLHLLVLPIYLYLTWHHKYWRKRGLVTARPLTLLGTYPGLLTRKSNLVFDVQKIYDKYKGKHRA 105
            |||.:|::.|.||..|.:..::|.|:....||..:||:  |..||..:.||:: .:.||   .|.
 Frog    13 ILLAVLLVLILLYGIWPYGLFKKMGIPGPTPLPFIGTF--LEFRKGMIQFDIE-CFKKY---GRM 71

  Fly   106 VGVFVTRQPQILVLDPELAHEVLVSNFRCYKDSLQSSYLRHAKWDKYARLNPFWASG-------- 162
            .|::..|||.:.::||.:...:||.  .||.:              :.....|..:|        
 Frog    72 WGMYDGRQPVLAIMDPAIIKTILVK--ECYTN--------------FTNRRNFGLNGPLESAITV 120

  Fly   163 ---QSWRRLRTDAQAGISGSRLRQAYNIWEQGGQMLTEYMTQQVAEKNNILETRDLCFRYTAHVM 224
               :.|:|:|:......:..:|::.:.|.:....:|.:.: |...:|:....|:|:...|:..|:
 Frog   121 AEDEQWKRIRSVLSPTFTSGKLKEMFQIMKDYSDILVKNV-QVSVDKDEPCATKDVIGAYSMDVI 184

  Fly   225 ADFIWGIDAGTLTRPMEQPNKVQEMASKWTSYAFYMLTLFMATIVAPCSRLL---LRFRFYPKET 286
            ....:.::..:|..| ..|..:.......|.   ::..:.:..::.|..|.:   |...|:||:.
 Frog   185 TSTSFSVNIDSLQNP-SNPFVIHIKNLLKTG---FLSPVIIFAVIFPFLRPIFEVLNISFFPKDF 245

  Fly   287 DEFFSNLTKESIELRLKAGDSTRTDYLSHLLQL-------------RDQKQATHDDLVGHALTVM 338
            .:||.|......|.|.|...|.|.|    ||||             ...|..|..:::..:|..:
 Frog   246 TQFFMNAVTSFREKRKKGDHSGRVD----LLQLMVDSGTTEGNDSSNQHKALTDAEIMAQSLIFI 306

  Fly   339 LDGYDTSGTALLHALYYLAENPAVQQKLRVEILSCMASEKSLDFEKLSSLQYLEQVIYESLRLSS 403
            ..||:|:.|||.:..|.||.:|.|||||..||.|.:..:.|..::.|..::||:.||.|:|||  
 Frog   307 FAGYETTSTALSYLFYNLATHPDVQQKLHEEIDSFLPDKASPTYDILMQMEYLDMVIQETLRL-- 369

  Fly   404 LIPQYTKVCTLPTVIRLSESKSLDVEV-------GMTIMIPNYQFHHDKQYFPEPEAFKPERF-- 459
                      .|...||......:||:       |...|||.|....|.:|:||||.|:||||  
 Frog   370 ----------FPPAGRLERVSKQNVEINGVSIPKGTVAMIPAYVLQRDPEYWPEPEEFRPERFSK 424

  Fly   460 DNGAYQELMRKGIFLPFSDGPRICMGVPLAMLTLKSALVHILSNFQVVRGRDRLIPKGDSGFGVV 524
            :|.|.|...   .||||.||||.|:|:..|:|::|.|:..:|.||.|....:.|||...|..||:
 Frog   425 ENRATQTPF---TFLPFGDGPRNCIGLRFALLSMKVAIATLLQNFSVRPCAETLIPMEFSTIGVL 486

  Fly   525  524
             Frog   487  486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp309a2NP_608689.2 p450 70..526 CDD:299894 138/491 (28%)
cyp3a4.1XP_002943949.2 p450 39..496 CDD:365848 138/494 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.