DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp309a1 and Cyp3a18

DIOPT Version :9

Sequence 1:NP_001259943.1 Gene:Cyp309a1 / 33438 FlyBaseID:FBgn0031432 Length:506 Species:Drosophila melanogaster
Sequence 2:NP_665725.2 Gene:Cyp3a18 / 252931 RGDID:628709 Length:497 Species:Rattus norvegicus


Alignment Length:510 Identity:127/510 - (24%)
Similarity:234/510 - (45%) Gaps:81/510 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 TIVHVAFAVVYFYL--TWYHKYWDKRGVVTAEPLTILGSYPGILINKSRSLILDVQDVYNKYKDK 72
            |.|.:|.:::.||:  |:.|..:.|.|:...:|:.:.|:    :.|....:.....|.|.||.  
  Rat    11 TWVLLATSLMLFYIYGTYSHGLFKKLGIPGPKPVPLFGT----IFNYGDGMWKFDDDCYKKYG-- 69

  Fly    73 YRTVGTFITRQPQLLVLDPALAHEILVDK-FSHFRDTITSSFVGHNPDDKYVAGSPFFSAGDKWK 136
             :..|.:...||.|.::||.:...:||.: :|.|.:......:|      ::..:...|..::||
  Rat    70 -KIWGFYEGPQPFLAIMDPEIIKMVLVKECYSVFTNRRCFGPMG------FMKKAITMSEDEEWK 127

  Fly   137 RLRSENVGGLTPSRLKMAYSIWEQSGRKLVEYIERARREQ--GDIIETRDLAYRFTANAMADFIW 199
            |||:......|..:||..:.:..|.|..|   ::..|||:  |:.|..:|:...::.:.:....:
  Rat   128 RLRTILSPTFTSGKLKEMFPLMRQYGDTL---LKNLRREEAKGEPINMKDIFGAYSMDVITGTSF 189

  Fly   200 GIDAGSLSG-------KVGEIGDFQKTSTDWSAHAFSSMIRFNKTLVAI----FVRKLFSM---R 250
            |::..||:.       |..:|..||               .|:..|:::    |:..::.|   .
  Rat   190 GVNVDSLNNPQDPFVQKAKKILKFQ---------------IFDPFLLSVVLFPFLTPIYEMLNFS 239

  Fly   251 FFTKATDEFFLRLTQDAVNLRQGGSGEGRTDYLSHLIQLQ-------QRGNSIHDSVGHALTVHL 308
            .|.:.:..||.:..:.....|...:.:.|.|:|..::..|       |:..|..:....|:....
  Rat   240 IFPRQSMNFFKKFVKTMKKNRLDSNQKSRVDFLQLMMNTQNSKGQESQKALSDLEMAAQAIIFIF 304

  Fly   309 DGFETSGAVLYHMLYSLSEHHEEQEKLRSEILEALASEGQISYDQINNLPYLDQCFNESLRLTTP 373
            .|::.:...:..::|.|:.....|:||::||..||.::..::||.:..:.|||...|||||| .|
  Rat   305 GGYDATSTSISFIMYELATRPNVQKKLQNEIDRALPNKAPVTYDALMEMEYLDMVVNESLRL-YP 368

  Fly   374 IGFFM-RICTKPTQINLGDDKTLDLEPGVTVMVPAYQYHHDNDIYPEASEFRPDRF--ENGAASV 435
            |...: |:..|..:||     .:.:..|..|.:|.|..|.:.:.:.|..||.|:||  ||     
  Rat   369 IATRLDRVSKKDVEIN-----GVFIPKGTVVTIPIYPLHRNPEYWLEPEEFNPERFSKEN----- 423

  Fly   436 LTKRG-----CFLPFGDGPRICLGMRVGQLSVKTAIVHILSNYQVEQMKK--VPL 483
               :|     .:||||:|||.|:|||...:|:|.|::.:|.|:.::..:|  :||
  Rat   424 ---KGSIDPYVYLPFGNGPRNCIGMRFALISMKLAVIGVLQNFNIQPCEKTQIPL 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp309a1NP_001259943.1 p450 49..481 CDD:299894 114/465 (25%)
Cyp3a18NP_665725.2 CYP3A 67..492 CDD:410743 113/450 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.