DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3515 and AT5G66240

DIOPT Version :10

Sequence 1:NP_608687.2 Gene:CG3515 / 33437 FlyBaseID:FBgn0031431 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_569031.1 Gene:AT5G66240 / 836756 AraportID:AT5G66240 Length:331 Species:Arabidopsis thaliana


Alignment Length:339 Identity:86/339 - (25%)
Similarity:148/339 - (43%) Gaps:58/339 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSIRLNDDAMRQFRVAKVFPETKHHTLAMEF-----------SSDGLRLL-VCDHSALSIFSSTR 53
            :|:.|:::.::......||.:......:::|           ..|.:||. |...:.|...:|.:
plant    11 VSLELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKK 75

  Fly    54 QVQVCKVPMHHYLPDVACFVQQDTRVLHST-SKHDYTIRCLDLNTRHCVRVFGGHAKTINRLASQ 117
                       |..|:.||....|.|::|: :..|.::|.|.|:....:|.|.||...:..|:..
plant    76 -----------YGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLC 129

  Fly   118 PGGENVFISAGRDDQVYMWDIRVKTHTHRIKNLRRPLCAFDPEGLFLATSSGTEGIQIRDVRM-- 180
            .||| .|||...|..|.:||.||:.....::...||..|:|.:||..|.:.|.. |::.|.||  
plant   130 SGGE-CFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAFGGY-IRMFDARMYE 192

  Fly   181 --------MGGEPSRKFVYQVNAKANWTQLQFAPNGKSLLLSTDHSWCFSVSAIDGTYQQSFT-- 235
                    :||:.|...|           ::|:.:|:.:||:|...:...:.:..||...:|:  
plant   193 KGPFEIFSVGGDLSEANV-----------VKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVK 246

  Fly   236 ---GYSNKLRLPLDATYTPDSQFILSGADKGRIHIWRAADGFPVAVLKGNNMGPVRCMRFNPRAT 297
               |.|.     |||.::|:..|::||:..|..|.|....|..|....|....| ..:::.|.:.
plant   247 PVAGEST-----LDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEP-PVIKWGPGSP 305

  Fly   298 MFVSSDSRIVFWMP 311
            |||:..|.:.|.:|
plant   306 MFVTGSSELAFVIP 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3515NP_608687.2 WD40 11..>309 CDD:441893 82/325 (25%)
WD40 repeat 28..62 CDD:293791 7/45 (16%)
WD40 repeat 67..106 CDD:293791 12/39 (31%)
WD40 repeat 111..151 CDD:293791 13/39 (33%)
WD40 repeat 155..194 CDD:293791 14/48 (29%)
WD40 repeat 200..235 CDD:293791 7/34 (21%)
WD40 repeat 245..280 CDD:293791 12/34 (35%)
WD40 repeat 287..309 CDD:293791 5/21 (24%)
AT5G66240NP_569031.1 WD40 <24..312 CDD:441893 81/317 (26%)
WD40 repeat 36..73 CDD:293791 6/36 (17%)
WD40 repeat 79..118 CDD:293791 12/38 (32%)
WD40 repeat 123..158 CDD:293791 13/35 (37%)
WD40 repeat 164..200 CDD:293791 11/36 (31%)
WD40 repeat 208..244 CDD:293791 8/46 (17%)
WD40 repeat 253..290 CDD:293791 12/41 (29%)

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