DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3515 and WDR82

DIOPT Version :10

Sequence 1:NP_608687.2 Gene:CG3515 / 33437 FlyBaseID:FBgn0031431 Length:395 Species:Drosophila melanogaster
Sequence 2:NP_079498.2 Gene:WDR82 / 80335 HGNCID:28826 Length:313 Species:Homo sapiens


Alignment Length:423 Identity:89/423 - (21%)
Similarity:150/423 - (35%) Gaps:137/423 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NSRVIIYSSTLVLLVFLQQVYTFCPSICTCEGDPNVRTWCIGAGLDVVPIQLNPDVRYINLTANR 71
            |:..||..:.|....||:    |......|..| .|..:    ||.|.|:|..|  ::|.|..:.
Human   200 NAMSIIKKACLTKPAFLE----FLKRRQVCSTD-RVTLY----GLMVKPVQRFP--QFILLLQDM 253

  Fly    72 ITN----------VHFTLTFYYKLEVLDLAGNRIEALGSRNFDTQQALRTLNLSDNAIVSIPKDA 126
            :.|          :...||   :||.|....|..:.|..:..:.||.  |.::||.:        
Human   254 LKNTPRGHPDRLSLQLALT---ELETLAEKLNEQKRLADQVAEIQQL--TKSVSDRS-------- 305

  Fly   127 FRGLQRLQT-----LKLCGNRIDTIHPAAFHDLRNLIE-----------------LDLEGN-ALT 168
              .|.:|.|     |.||    :|:....:.|...||:                 ::.:|. .::
Human   306 --SLNKLLTSGQRQLLLC----ETLTETVYGDRGQLIKSKERRVFLLNDMLVCANINFKGQLEIS 364

  Fly   169 SLEPSTLRHLYSLEVLSFQNNQLLEV-----PYERN---LEHLGQRLQLLDLSVNLLEYIANDSF 225
            ||.|...:::..... :....|::||     .|:::   ::|.|                |..:.
Human   365 SLVPLGPKYVVKWNT-ALPQVQVVEVGQDGGTYDKDNLLIQHAG----------------AKKAT 412

  Fly   226 VALRELRTLRLGGNILTELDYGAFHGLSGL-KALDIVDNNLTVVPTLQLSKLCNLTYLSLSGNYF 289
            .|.:....:.||...|       |..|..| |.|.:|:....::.||.             |.|.
Human   413 AAGQAQNKVYLGPPRL-------FQELQDLQKDLAVVEQITLLISTLH-------------GTYQ 457

  Fly   290 ESLPAVAFLNLFQLQQ--LHLDRLDRLQRIDARAFVDNAALRILTLDDNPSFASLPL--RLFHSN 350
            .       ||:...|.  |.|.||.|::..:..: .:...||:| |...|..:..|:  .:....
Human   458 N-------LNMTVAQDWCLALQRLMRVKEEEIHS-ANKCRLRLL-LPGKPDKSGRPISFMVVFIT 513

  Fly   351 PN-LAEISMRRNALIRLDAVHFPLDRLHRLELG 382
            || |::||.              ::|||..::|
Human   514 PNPLSKISW--------------VNRLHLAKIG 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3515NP_608687.2 WD40 11..>309 CDD:441893 69/341 (20%)
WD40 repeat 28..62 CDD:293791 10/33 (30%)
WD40 repeat 67..106 CDD:293791 9/48 (19%)
WD40 repeat 111..151 CDD:293791 10/44 (23%)
WD40 repeat 155..194 CDD:293791 7/56 (13%)
WD40 repeat 200..235 CDD:293791 4/34 (12%)
WD40 repeat 245..280 CDD:293791 8/35 (23%)
WD40 repeat 287..309 CDD:293791 5/23 (22%)
WDR82NP_079498.2 WD40 <12..302 CDD:441893 29/117 (25%)
WD 1 19..58
WD40 repeat 24..61 CDD:293791
WD40 repeat 67..105 CDD:293791
WD 2 105..144
WD40 repeat 110..148 CDD:293791
WD 3 146..184
WD40 repeat 153..190 CDD:293791
WD 4 192..231 9/35 (26%)
WD40 repeat 197..233 CDD:293791 10/37 (27%)
WD 5 236..276 10/44 (23%)
WD40 repeat 241..282 CDD:293791 10/45 (22%)
WD 6 280..313 9/44 (20%)
WD40 repeat 285..307 CDD:293791 6/33 (18%)
Blue background indicates that the domain is not in the aligned region.

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