DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slh and Stxbp2

DIOPT Version :9

Sequence 1:NP_001137769.2 Gene:Slh / 33434 FlyBaseID:FBgn0264978 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_112388.1 Gene:Stxbp2 / 81804 RGDID:619967 Length:594 Species:Rattus norvegicus


Alignment Length:677 Identity:145/677 - (21%)
Similarity:259/677 - (38%) Gaps:161/677 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KALAAEPV-------------WKILIYDRVGQDIISPIISIKELRELGVTLHVQLHSDRDSIPDV 75
            ||:..|.:             ||:||.|.....|:|....:.::...|:|:...::..|:.||.:
  Rat     7 KAVVVEKILSGVIRSVKKDGEWKVLIMDHPSMRILSSCCKMSDILAEGITIVEDINKRREPIPSL 71

  Fly    76 PAIYFCLPTDENLDRIQQDFS---SGLYDVYHLNFLAPITRSKIENLAAAALHAGCVANIHRVYD 137
            .|||...||::::..:..||.   :..|...|:.|...........|..:.| |..|..:..:  
  Rat    72 EAIYLLSPTEKSVQALIADFQGTPTFTYKAAHIFFTDTCPEPLFSELGRSRL-AKVVKTLKEI-- 133

  Fly   138 QYVNFISLEDDFFILKHQQSDQLSYYAINRANTRDEEMEALMDSIVDSLFALFVTLGNVPIIRC- 201
             ::.|:..|...|.|....| ..:.|...||..|..:::.|...|.    .|..||...|.||. 
  Rat   134 -HLAFLPYEAQVFSLDAPHS-TYNLYCPFRAGERGRQLDVLAQQIA----TLCATLQEYPSIRYR 192

  Fly   202 --PRNSA--AEMVARKLEKKLRENLWDARANLFHMDATQAGGGVFSFQRPVLLLLDRNMDLATPL 262
              |.::|  |..|..||             |.|..|....|.|. ...|..||::||..|..:||
  Rat   193 KGPEDTAQLAHAVLAKL-------------NAFKADTPSLGEGP-EKTRSQLLIMDRAADPVSPL 243

  Fly   263 HHTWSYQALVHDVLDLGLNLVYVEDET----ASAGARKKPKACDLDRNDRFWMTHKGSPFPTVAE 323
            .|..::||:.:|       |:::|.:|    .:..:..:.||..||.:|..|:..:......|::
  Rat   244 LHELTFQAMAYD-------LLHIEQDTYRYETTGLSESREKAVLLDEDDDLWVELRHMHIADVSK 301

  Fly   324 AIQEELESYRNSEEEIKRLKTSMGIEGESDIAFSLVNDTTARLTNAVNSLPQLMEKKRLIDMHTK 388
            .:.|.|:::..|    |||.|..          :.:.|    |::.:..:||..::......|..
  Rat   302 KVTELLKTFCES----KRLTTDK----------ANIKD----LSHILKKMPQYQKELNKYSTHLH 348

  Fly   389 IATAILNFIKARRLDSFFEIE-----------EKVMSKQTLDRPLLDLLRDGEFGQAEDKLRLYI 442
            :|...:...|. .::....:|           ||:  |.|: :.::.:|.|... ...||:|:.:
  Rat   349 LADDCMKHFKG-SVEKLCGVEQDLAMGSDAEGEKI--KDTM-KLIVPVLLDASV-PPYDKIRVLL 408

  Fly   443 IYFICAQQLPESEQERLKEALQAAGCDLTALAYVQRWKGIMNRSPSISQATQYEGGGTKTVSMFT 507
            :|.:....:.|   |.|.:.:|.|.        ||.:..::.....:        |||.|     
  Rat   409 LYILLRNGVSE---ENLAKLIQHAN--------VQSYSNLIRNLEQL--------GGTVT----- 449

  Fly   508 KLVSQGSSFVMEGVKNLVVKRHNL----------PVTK-ITEQVMECRSNAETDDYLYLDPKLLK 561
              .|.||     |..:.:.:|..:          ||.| :.|.|:|.|.:.:...:: .||..:.
  Rat   450 --NSAGS-----GTSSRLERRERMEPTYQLSRWSPVIKDVMEDVVEDRLDRKLWPFV-SDPAPVS 506

  Fly   562 GGEVL---------PKNRAPFQ-----DAVVFMVGGGNYIEYQNLVDFIKQKQTSNVQR------ 606
            ..:..         .||:|..:     ..:|::|||         |...:.:....|.|      
  Rat   507 SSQAAVSSARFGHWHKNKAGIEARAGPRLIVYIVGG---------VAMSEMRAAYEVTRATEGKW 562

  Fly   607 RIIYGASTLTNARQFLKELSALGGEIQ 633
            .::.|:|.:....:||.:|..|..:::
  Rat   563 EVLIGSSHILTPTRFLDDLRTLDQKLE 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlhNP_001137769.2 Sec1 1..630 CDD:301618 145/672 (22%)
Stxbp2NP_112388.1 Sec1 29..574 CDD:279352 137/638 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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