DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slh and ATSLY1

DIOPT Version :10

Sequence 1:NP_995614.1 Gene:Slh / 33434 FlyBaseID:FBgn0264978 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_179389.1 Gene:ATSLY1 / 816310 AraportID:AT2G17980 Length:627 Species:Arabidopsis thaliana


Alignment Length:645 Identity:250/645 - (38%)
Similarity:374/645 - (57%) Gaps:33/645 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LTLRERQINAIKQMLNLNSQ-QPKALAAEPVWKILIYDRVGQDIISPIISIKELRELGVTLHVQL 65
            |.||::|...:.:|||||.. .|...|.|.|:|||||||..|:|:||:..:|:||:.||||...:
plant     3 LNLRQKQTECVIRMLNLNQPLNPSGTANEEVYKILIYDRFCQNILSPLTHVKDLRKHGVTLFFLI 67

  Fly    66 HSDRDSIPDVPAIYFCLPTDENLDRIQQDFSSGLYDVYHLNFLAPITRSKIENLAAAALHAGCVA 130
            ..||..:.||||:||..||:.||.||..|.|..|||.:||||.:.|.|..:|.||:..|.:|.|.
plant    68 DKDRQPVHDVPAVYFVQPTESNLQRIIADASRSLYDTFHLNFSSSIPRKFLEELASGTLKSGSVE 132

  Fly   131 NIHRVYDQYVNFISLEDDFFILKHQQSDQLSYYAINRANTRDEEMEALMDSIVDSLFALFVTLGN 195
            .:.:|:|||:.|::|||:.|.|    :.|.:|..:|..:..::|:..:::.:...||.:.||||.
plant   133 KVSKVHDQYLEFVTLEDNLFSL----AQQSTYVQMNDPSAGEKEINEIIERVASGLFCVLVTLGV 193

  Fly   196 VPIIRCPRNSAAEMVARKLEKKLRENLWDARANLFHMDATQAGGGVFSFQRPVLLLLDRNMDLAT 260
            ||:||||....|||||..|::|||::|. ::.|||    |:.||.:.|||||:|.:.|||.:|:.
plant   194 VPVIRCPSGGPAEMVASLLDQKLRDHLL-SKNNLF----TEGGGFMSSFQRPLLCIFDRNFELSV 253

  Fly   261 PLHHTWSYQALVHDVLDLGLNLVYVEDETASAGARKKPKACDLDRNDRFWMTHKGSPFPTVAEAI 325
            .:.|.:.|:.||||||.|.||.:.|:      |.:..||:.:||.:|.||..:....||.||..|
plant   254 GIQHDFRYRPLVHDVLGLKLNQLKVQ------GEKGPPKSFELDSSDPFWSANSTLEFPDVAVEI 312

  Fly   326 QEELESYRNSEEEIKRLKTSMGIEGESDIAFSLVNDTTARLTNAVNSLPQLMEKKRLIDMHTKIA 390
            :.:|..|:...||:.: ||..|...|.|....:.|..|..|.|.|.|||:|.|:|::||.||.||
plant   313 ETQLNKYKRDVEEVNK-KTGGGSGAEFDGTDLIGNIHTEHLMNTVKSLPELTERKKVIDKHTNIA 376

  Fly   391 TAILNFIKARRLDSFFEIEEKVMSKQTLDRPLLDLLRDGEFGQAEDKLRLYIIYFICAQQLPESE 455
            ||:|..||.|.:|:|.:.|..:|.:..:||..|.....|: |...||||..|:|.|..:.:.:||
plant   377 TALLGQIKERSIDAFTKKESDMMMRGGIDRTELMAALKGK-GTKMDKLRFAIMYLISTETINQSE 440

  Fly   456 QERLKEALQAAGCDLTALAYVQRWKGIMNRSPSISQATQYEGGGTKTVSMFTKLVSQGSSFVMEG 520
            .|.::.||..|..|.:|..||::.|.:   :.|.:..:......:..|....||..|..|.|..|
plant   441 VEAVEAALNEAEADTSAFQYVKKIKSL---NASFAATSANSASRSNIVDWAEKLYGQSISAVTAG 502

  Fly   521 VKNLVVKRHNLPVTKITEQVMECRSNAETDDYLYLDPKLLK----GGEVLPKNRAPFQDAVVFMV 581
            ||||:.....|.||:..|.:.|.:.|.|.|.|.:|||:..|    ||..:   :.||::|:|||:
plant   503 VKNLLSSDQQLAVTRTVEALTEGKPNPEIDSYRFLDPRAPKSSSSGGSHV---KGPFREAIVFMI 564

  Fly   582 GGGNYIEYQNLVDFIKQKQTSNVQRRIIYGASTLTNARQFLKELSALGGE--IQSPTATS 639
            |||||:||.:|.:..:::.|   .:.:||||:.:.|..:.:::|..||.:  :..|.|::
plant   565 GGGNYVEYGSLQELTQRQLT---VKNVIYGATEILNGGELVEQLGLLGKKMGLGGPVAST 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlhNP_995614.1 Sec1 33..624 CDD:460020 232/594 (39%)
ATSLY1NP_179389.1 Sec1 35..604 CDD:460020 232/594 (39%)

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