DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slh and stxbp1b

DIOPT Version :9

Sequence 1:NP_001137769.2 Gene:Slh / 33434 FlyBaseID:FBgn0264978 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001082845.1 Gene:stxbp1b / 557717 ZFINID:ZDB-GENE-060531-166 Length:605 Species:Danio rerio


Alignment Length:655 Identity:137/655 - (20%)
Similarity:264/655 - (40%) Gaps:131/655 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 KALAAEPV-------------WKILIYDRVGQDIISPIISIKELRELGVTLHVQLHSDRDSIPDV 75
            ||:..|.:             ||:|:.|::...::|....:.::...|:|:...:...|:.:|.:
Zfish     7 KAIVGEKIMNDVIRKVKKKGEWKVLVVDKLSMRMVSSCCKMTDIMSEGITIVEDITKKREPLPTM 71

  Fly    76 PAIYFCLPTDENLDRIQQDFSSGLYDVY---HLNFLAPITRSKIENLAAAALHAGCVANIHRVYD 137
            .||:...|:||:::.:..||......:|   |:.|...|..| :.||.:.:..:..:..:..:  
Zfish    72 EAIFLITPSDESVEGLINDFRDPRNPIYRGAHVFFTDAIPDS-LFNLLSKSRASKSIKTLTEI-- 133

  Fly   138 QYVNFISLEDDFFILKHQQSDQLSYYAINRANTRDEEMEALMDSIVDSLFALFVTLGNVPIIRCP 202
             ::.|:..|...|.:....:.| .:|:..:|:.:::.:|.|.:.|.    .|..||...|.:|..
Zfish   134 -HIAFLPYESQVFSVDKSDAFQ-DFYSPFKADVKNQVLERLAEQIA----TLCATLKEYPAVRYR 192

  Fly   203 ---RNSAAEMVARKLEKKLRENLWDARANLFHMDATQAGGGVFSFQRPVLLLLDRNMDLATPLHH 264
               :::|  ::|:.|:.||         :.:..|....|.|. ...|..||:|||..|..:||.|
Zfish   193 GEYKDNA--VLAQMLQDKL---------DGYKADDPTLGEGP-DKARSQLLILDRGFDPVSPLLH 245

  Fly   265 TWSYQALVHDVLDLGLNLVYVEDETASAGARKKPKACDLDRNDRFWMTHKGSPFPTVAEAIQEEL 329
            ..::||:.:|:|.:. |.||:.:.:.....|.|...  ||.:|..|||.:......|:.|:.:.|
Zfish   246 ELTFQAMAYDLLPIE-NDVYMYETSGMGDTRMKEVL--LDEDDDLWMTLRHKHIAEVSTAVTKSL 307

  Fly   330 ESYRNSEEEIKRLKTSMGIEGESDIAFSLVNDTTARLTNAVNSLPQLMEKKRLIDMHTKIATAIL 394
            :.:..|    |::.|     ||        ..|...|:..:..:||..::......|..:|...:
Zfish   308 KDFSAS----KKMNT-----GE--------KTTMKELSQMLKKMPQYQKELSKYSTHLHLAEDCM 355

  Fly   395 NFIKARRLDSFFEIE-----------EKVMSKQTLDRPLLDLLRDGEFGQAEDKLRLYIIYFICA 448
            ...:. .:|....:|           ||:....   |.::.:|.|... ...||:|:.::|....
Zfish   356 KQYQG-TVDKLCRVEQDLAMGTDAEGEKIKDPM---RAIVPILLDATV-TIMDKIRIILLYIFLK 415

  Fly   449 QQLPESEQERLKEALQAAGCD------LTALAYVQRWKGIMNRSPSIS-QATQYEGGGTKTVSMF 506
            ..:.|   |.|.:.||.|...      ::.:|::    |:    |.|| |||..:|..:......
Zfish   416 NGVSE---ENLCKLLQHAQIPPEDSDIISNMAHM----GV----PIISEQATTRKGKKSDRKERI 469

  Fly   507 TKLVSQGSSFVMEGVKNLVVKRHNLPVTKITEQVME--CRSNAETDDYLYLDPKLLKGGEVLP-- 567
            ::...|.|.:                 |.:.:.:||  .....:...|.|:..:.:.......  
Zfish   470 SEQTYQLSRW-----------------TPLVKDIMEDAIEDKLDPKQYPYISTRTVSSKTTTATS 517

  Fly   568 -------KNRAPFQ-----DAVVFMVGGGNYIEYQNLVDFIKQKQTSNVQRRIIYGASTLTNARQ 620
                   ||::|.:     ..:||:|||..|.|.:.:.:.   .|.:.....:|....|:|..: 
Zfish   518 ARYGNWHKNKSPGEIRNGPRIIVFIVGGVTYSEMRCVYEV---TQANGKWEALIGSTHTITPVK- 578

  Fly   621 FLKEL 625
            :||.|
Zfish   579 YLKHL 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlhNP_001137769.2 Sec1 1..630 CDD:301618 137/655 (21%)
stxbp1bNP_001082845.1 Sec1 29..576 CDD:279352 129/623 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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