DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slh and stxbp3

DIOPT Version :9

Sequence 1:NP_001137769.2 Gene:Slh / 33434 FlyBaseID:FBgn0264978 Length:639 Species:Drosophila melanogaster
Sequence 2:XP_009294850.1 Gene:stxbp3 / 406780 ZFINID:ZDB-GENE-040426-2833 Length:593 Species:Danio rerio


Alignment Length:632 Identity:130/632 - (20%)
Similarity:249/632 - (39%) Gaps:114/632 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 WKILIYDRVGQDIISPIISIKELRELGVTLHVQLHSDRDSIPDVPAIYFCLPTDENLDRIQQDFS 96
            |.|||.|.....::|....:.:|...|:::...|..:|:.:||:.||||..||.|.:|....||.
Zfish    28 WNILILDDFTTRLLSSCCKMSDLMSEGISVLENLFKNREPVPDMKAIYFMAPTVECIDAFINDFK 92

  Fly    97 -----SGLYDVYHLNFLAPITRSKIENLAAAALHAGCVANIHRVYDQYVNFISLEDDFFILKHQQ 156
                 ...| |:..::.......|::.        .|..:|.:..:..::|:..|...|..::.:
Zfish    93 PKPKYKAAY-VFFTDYCPDELFDKMKK--------NCAKHIKKCKEINISFLPQEAQVFTCENPE 148

  Fly   157 SDQLSYYAINRANTRDEEMEALMDSIVDSLFALFVTLGNVPIIRCPRNSA---AEMVARKLEKKL 218
            :.:..|...:      ::.|..:|.|.|.:..|..||...|.:|..|.|.   .:|:|..::.||
Zfish   149 AFKKIYSGFS------QDREKTLDKIADQIVTLCATLDEYPGVRYKRESTPGYGKMLAELVDNKL 207

  Fly   219 RENLWDARANLFHMDATQAGGGVFSFQRPVLLLLDRNMDLATPLHHTWSYQALVHDVLDLGLNLV 283
                    |..:.:|...........|   ||::||.||..:|:.|..:|||:.:|::.:..|  
Zfish   208 --------ARHYELDEITTKKEKTPAQ---LLIVDRAMDPVSPILHELTYQAMAYDLIPINNN-- 259

  Fly   284 YVEDETASAGARKKPKACDLDRNDRFWMTHKGSPFPTVAEAIQEELESYRNSEEEIKRLKTSMGI 348
             :.:.....|::|:..   |:.:|..|:..:......|.|.|.:.::....|.:|.:        
Zfish   260 -IYEYKMKDGSKKEAL---LNEDDELWVKLRHRHIAEVTEQIPKLVKDISASRDEKQ-------- 312

  Fly   349 EGESDIAFSLVNDTTARLTNAVNSLPQLMEKKRLIDMHTKIATAIL-----NFIKARRLDSFFEI 408
            :|:..|       |...|:..:..:|...::.....:|..:|..::     |..|..:.:....:
Zfish   313 QGDGKI-------TIGALSQLMKKMPAFRKQVTQKTVHLHLAEDLMGHYQKNVEKLCKAEQDLAV 370

  Fly   409 EEKVMSKQTLD--RPLLDLLRDGEFGQAEDKLRLYIIYFICAQQLPESEQERLKEALQAAGCDLT 471
            ......::..|  |.||.:|....  ...||:|..::|..   .|..:..|.|.:.:|....: .
Zfish   371 GADAEGQKVKDPMRTLLPVLLHQH--DTTDKIRAVLLYIF---SLNGTTTENLNKLIQNVKIE-D 429

  Fly   472 ALAYVQRWKGI-------MNRSPSISQATQYEGGGTKTVSMFTKLVSQGSSFVME-GVKN-LVVK 527
            ...|:|.|..:       .|.|..:::..:.| ..|..||.:|.::..    :|| .|:| |.:|
Zfish   430 KDGYIQNWNQLGVPILSSSNSSRKVARRDRSE-QETYNVSRWTPVIKD----IMEDAVENKLDIK 489

  Fly   528 RHNLPVTKITEQVMEC----------RSNAETDDYLYLDPKLLKGGEVLPKNRAPFQDAVVFMVG 582
              :.|...      ||          |..:....:....|..:|.|..|          ::|::|
Zfish   490 --DWPFQS------ECPSAWNGSRAVRVLSARQKHKGSSPGDMKNGSRL----------IIFVLG 536

  Fly   583 GGNYIEYQNLVDFIKQKQTSNVQRRIIYGASTLTNARQFLKELSALG 629
            |.:|.|.:...:.    ..:|....:|.|::.:...|..|:::..||
Zfish   537 GVSYSEMRCAYEV----TNTNKSCEVIIGSTHILTPRSLLEDIYNLG 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlhNP_001137769.2 Sec1 1..630 CDD:301618 130/632 (21%)
stxbp3XP_009294850.1 Sec1 30..568 CDD:279352 125/617 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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