DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slh and sly1

DIOPT Version :9

Sequence 1:NP_001137769.2 Gene:Slh / 33434 FlyBaseID:FBgn0264978 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_588374.1 Gene:sly1 / 2539096 PomBaseID:SPCC74.01 Length:639 Species:Schizosaccharomyces pombe


Alignment Length:656 Identity:238/656 - (36%)
Similarity:379/656 - (57%) Gaps:58/656 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLRERQINAIKQMLNLN------SQQPKALAAEPVWKILIYDRVGQDIISPIISIKELRELGVTL 61
            :|||.||.:::::||||      ...|:..:..|:||:||:|:.|.:.||.::.|.:||:.|||:
pombe    11 SLREAQIQSLEKLLNLNQDVNELESSPQHASNFPIWKVLIFDKAGSETISSVLRISDLRKHGVTV 75

  Fly    62 HVQLHSDRDSIPDVPAIYFCLPTDENLDRIQQDFSSGLYDVYHLNFLAPITRSKIENLAAAALHA 126
            |:.:.|.|..|.|||||||..||.||::.|.:|.|.|||:..::.|.:.|:|:.:|..|..|...
pombe    76 HMNITSFRQPIADVPAIYFVQPTQENIELIIEDLSKGLYESAYVCFSSTISRALLEQFAELASKT 140

  Fly   127 GCVANIHRVYDQYVNFISLEDDFFILKHQQSDQLS--YYAINRANTRDEEMEALMDSIVDSLFAL 189
            .....||:|||||:|::.||.|||.|      ||.  ::..:..::.:..:.:.:..||:.||::
pombe   141 NTSHMIHQVYDQYLNYVVLESDFFSL------QLPKIFHTFHNPSSDEALINSRVQDIVNGLFSV 199

  Fly   190 FVTLGNVPIIRCPRNSAAEMVARKLEKKLRENLWDARANLFHMDATQAGGGVFSFQRPVLLLLDR 254
            .||||.:||||||:.|||||||:||.::|:::|         |:...|...|....||:|:||||
pombe   200 IVTLGTIPIIRCPQGSAAEMVAQKLNQRLKDHL---------MNTKDAFVSVNPKPRPILILLDR 255

  Fly   255 NMDLATPLHHTWSYQALVHDVLDLGLNLVYVEDETASAGARKKPKACDLDRNDRFWMTHKGSPFP 319
            .:||...::|:|:||||:||.|::.||.:.|  |:...|...| :..|||.||.||.::...|||
pombe   256 TVDLIPMINHSWTYQALIHDTLNMQLNRITV--ESVDDGKMTK-RFYDLDGNDFFWESNASKPFP 317

  Fly   320 TVAEAIQEELESYRNSEEEIKRLKTSMGIEGESDIAFSLVNDTTARLTNAVNSLPQLMEKKRLID 384
            .|||.|.|||..|:|...||.|   ..|:....::......|:| .|.:||:.||:|..:|:::|
pombe   318 KVAENIDEELTRYKNDASEITR---KSGVSSLEEVNVDAFADST-YLKSAVSLLPELTARKQILD 378

  Fly   385 MHTKIATAILNFIKARRLDSFFEIEEKVMSKQTLDR-PLLDLLRDGEFGQAEDKLRLYIIYFICA 448
            ||..||||:|..|:.|.||.||::|:.:..   |:| .:|..:.:.|.|..|||||.:||:::..
pombe   379 MHMNIATALLKAIQERHLDDFFQLEDNITG---LNRSAILACINNKEQGTPEDKLRFFIIWYLSV 440

  Fly   449 QQLPESEQERLKEALQAAGCDLTALAYVQRWKGIMNRSPSISQATQYEGG-------------GT 500
            ..:|.|:.:..:|||...||.|.||.:|:|.:.|...:...|..|:...|             .|
pombe   441 DSVPASDLQAYEEALVNNGCTLEALNFVKRVREITKMTMLASSTTRPATGQTGDNLFRGFSSLST 505

  Fly   501 KTVSMFTKLVSQGSSFVMEGVKNLVVKRHNLPVTKITEQVMECRS---NAETDDYLYLDPKLLKG 562
            :....|.:....|...::.||:||:..|.:..:|.|.:.:|:..|   :.:|:.||.||||..:.
pombe   506 RFTDRFKEAGIGGLENIISGVRNLIPFRKDGTITSIVQSLMDPGSSPASKQTESYLLLDPKSARA 570

  Fly   563 GEV-----LPKNRAPFQDAVVFMVGGGNYIEYQNLVDFIKQKQTSNVQRRIIYGASTLTNARQFL 622
            ..|     ....|..|.:|:|.::|||||:||.||.|:.:::   |.::|||||::.:.:..:|:
pombe   571 ITVNNDPRAMNKRQTFSEAIVCVLGGGNYLEYGNLADWAREQ---NPKKRIIYGSTDILSPSEFM 632

  Fly   623 KELSAL 628
            :|:::|
pombe   633 EEMASL 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlhNP_001137769.2 Sec1 1..630 CDD:301618 238/656 (36%)
sly1NP_588374.1 SEC1 10..639 CDD:227487 238/656 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 372 1.000 Domainoid score I138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5650
Inparanoid 1 1.050 396 1.000 Inparanoid score I389
OMA 1 1.010 - - QHG53926
OrthoFinder 1 1.000 - - FOG0004255
OrthoInspector 1 1.000 - - oto101643
orthoMCL 1 0.900 - - OOG6_101825
Panther 1 1.100 - - LDO PTHR11679
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1350
SonicParanoid 1 1.000 - - X3513
TreeFam 00.000 Not matched by this tool.
1212.000

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