DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slh and SCFD1

DIOPT Version :9

Sequence 1:NP_001137769.2 Gene:Slh / 33434 FlyBaseID:FBgn0264978 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_057190.2 Gene:SCFD1 / 23256 HGNCID:20726 Length:642 Species:Homo sapiens


Alignment Length:636 Identity:368/636 - (57%)
Similarity:485/636 - (76%) Gaps:18/636 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLRERQINAIKQMLNLNSQQPKALAAEPVWKILIYDRVGQDIISPIISIKELRELGVTLHVQLHS 67
            ::||||..|:|:|||.|....|....|||||:|||||.|||||||::|:||||::|:|||:.|||
Human    14 SIRERQTVALKRMLNFNVPHIKNSTGEPVWKVLIYDRFGQDIISPLLSVKELRDMGITLHLLLHS 78

  Fly    68 DRDSIPDVPAIYFCLPTDENLDRIQQDFSSGLYDVYHLNFLAPITRSKIENLAAAALHAGCVANI 132
            |||.||||||:||.:||:||:||:.||..:.||:.|:|||::.|:|||:|::|.|||.|..|..:
Human    79 DRDPIPDVPAVYFVMPTEENIDRMCQDLRNQLYESYYLNFISAISRSKLEDIANAALAASAVTQV 143

  Fly   133 HRVYDQYVNFISLEDDFFILKHQQSDQLSYYAINRANTRDEEMEALMDSIVDSLFALFVTLGNVP 197
            .:|:|||:|||:||||.|:|.:|..:.:||.||||.:..|.|||.:||:||||||..|||||.||
Human   144 AKVFDQYLNFITLEDDMFVLCNQNKELVSYRAINRPDITDTEMETVMDTIVDSLFCFFVTLGAVP 208

  Fly   198 IIRCPRNSAAEMVARKLEKKLRENLWDARANLFHMDATQAGGGVFSFQRPVLLLLDRNMDLATPL 262
            ||||.|.:||||||.||:|||||||.|||.:||..|.  .|.|.||||||:|:|:|||:||||||
Human   209 IIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTGDT--LGAGQFSFQRPLLVLVDRNIDLATPL 271

  Fly   263 HHTWSYQALVHDVLDLGLNLVYVED----ETASAGA---RKKPKACDLDRNDRFWMTHKGSPFPT 320
            ||||:||||||||||..||.|.:|:    |.:.|||   ||..|:.||...|:||..|||||||.
Human   272 HHTWTYQALVHDVLDFHLNRVNLEESSGVENSPAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPE 336

  Fly   321 VAEAIQEELESYRNSEEEIKRLKTSMGIEGESDIAFSLVNDTTARLTNAVNSLPQLMEKKRLIDM 385
            |||::|:||||||..|:|:||||:.||:|||.:.|.|:::|.||:||:||:|||:|:|||||||:
Human   337 VAESVQQELESYRAQEDEVKRLKSIMGLEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDL 401

  Fly   386 HTKIATAILNFIKARRLDSFFEIEEKVMSKQTLDRPLLDLLRDGEFGQAEDKLRLYIIYFICAQQ 450
            ||.:|||:|..||||:||.:||.|||:|||.|||:.|||::.|.:.|..|||:||::||:|..||
Human   402 HTNVATAVLEHIKARKLDVYFEYEEKIMSKTTLDKSLLDIISDPDAGTPEDKMRLFLIYYISTQQ 466

  Fly   451 LP-ESEQERLKEALQAAGCDLTALAYVQRWKGIMNRSPSISQATQYEGGGTKTVSMFTKLVSQGS 514
            .| |::.|:.|:||..|||:|..|.|:::||.....:   |....|....||.:.:.:::::.||
Human   467 APSEADLEQYKKALTDAGCNLNPLQYIKQWKAFTKMA---SAPASYGSTTTKPMGLLSRVMNTGS 528

  Fly   515 SFVMEGVKNLVVKRHNLPVTKITEQVMECRSNAETDDYLYLDPKLLKGGE-VLPKNRAPFQDAVV 578
            .||||||||||:|:.|||||:|.:.:||.:||.|||||.|.|||:|:|.: .:|:|:.|||:|:|
Human   529 QFVMEGVKNLVLKQQNLPVTRILDNLMEMKSNPETDDYRYFDPKMLRGNDSSVPRNKNPFQEAIV 593

  Fly   579 FMVGGGNYIEYQNLVDFIKQKQTSNVQRRIIYGASTLTNARQFLKELSALG 629
            |:||||||||||||||:||.||    .:.|:||.|.|.||.||:|:||.||
Human   594 FVVGGGNYIEYQNLVDYIKGKQ----GKHILYGCSELFNATQFIKQLSQLG 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlhNP_001137769.2 Sec1 1..630 CDD:301618 368/636 (58%)
SCFD1NP_057190.2 Sec1 44..629 CDD:307231 344/593 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141685
Domainoid 1 1.000 693 1.000 Domainoid score I133
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5650
Inparanoid 1 1.050 727 1.000 Inparanoid score I619
Isobase 1 0.950 - 0 Normalized mean entropy S1059
OMA 1 1.010 - - QHG53926
OrthoDB 1 1.010 - - D168850at33208
OrthoFinder 1 1.000 - - FOG0004255
OrthoInspector 1 1.000 - - oto90726
orthoMCL 1 0.900 - - OOG6_101825
Panther 1 1.100 - - LDO PTHR11679
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1350
SonicParanoid 1 1.000 - - X3513
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1514.890

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