DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slh and Stxbp3

DIOPT Version :10

Sequence 1:NP_995614.1 Gene:Slh / 33434 FlyBaseID:FBgn0264978 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_035634.1 Gene:Stxbp3 / 20912 MGIID:107362 Length:592 Species:Mus musculus


Alignment Length:644 Identity:129/644 - (20%)
Similarity:251/644 - (38%) Gaps:136/644 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EPVWKILIYDRVGQDIISPIISIKELRELGVTLHVQLHSDRDSIPDVPAIYFCLPTDENLDRIQQ 93
            |..|||::.|.....::|....:.:|.|.|:|:...::.:|:.:..:.|:||..||.:::|...:
Mouse    29 EGEWKIMLLDEFTTKLLSSCCKMTDLLEEGITVIENIYKNREPVRQMKALYFISPTPKSVDCFLR 93

  Fly    94 DFSS-------GLYDVYHLNFLAPITRSKIENLAAAALHAGCVANIHRVYDQYVNFISLEDDFFI 151
            ||.|       ..| :|..:|......:||:        |.|..:|.|..:..::||..|...:.
Mouse    94 DFGSKSEKKYKAAY-IYFTDFCPDSLFNKIK--------ASCSKSIRRCKEINISFIPQESQVYT 149

  Fly   152 LKHQQSDQLSYYAINRANTRDEEMEALMDSIVDSLFALFVTLGNVPIIRC---PRNSAAEMVARK 213
            |   ......||..:...:.....|.:|:::.:.:..:..||...|.:|.   |.::|::: |:.
Mouse   150 L---DVPDAFYYCYSPDPSNASRKEVVMEAMAEQIVTVCATLDENPGVRYKSKPLDNASKL-AQL 210

  Fly   214 LEKKLRENLWDARANLFHMDATQAGGGVFSFQRPVLLLLDRNMDLATPLHHTWSYQALVHDVLDL 278
            :||||.:        .:.:|..   |.:....:..||::||..|..:.:.|..::||:.:|:|. 
Mouse   211 VEKKLED--------YYKIDEK---GLIKGKTQSQLLIIDRGFDPVSTVLHELTFQAMAYDLLP- 263

  Fly   279 GLNLVYVEDETASAGARKKPKACDLDRNDRFWMTHKGSPFPTVAEAI---QEELESYRNSEEEIK 340
                  :|::|.......|.|...|:.:|..|:..:......|.|.|   .:|:.|.:.:.|.  
Mouse   264 ------IENDTYKYKTDGKEKEAVLEEDDDLWVRVRHRHIAVVLEEIPKLMKEISSTKKATEG-- 320

  Fly   341 RLKTSMGIEGESDIAFSLVNDTTARLTNAVNSLPQLMEKKRLIDMHTKIATAILNFIKARRLDSF 405
              |||:                 :.||..:..:|...::.....:|..:|...:|..|       
Mouse   321 --KTSL-----------------SALTQLMKKMPHFRKQISKQVVHLNLAEDCMNKFK------- 359

  Fly   406 FEIEEKVMSKQTLDRPLLDLLRDGEFGQAE-------------------DKLRLYIIYFICAQQL 451
            ..||:...::|.     |.|..|.| ||..                   ||:|..::|.......
Mouse   360 LNIEKLCKTEQD-----LALGTDAE-GQRVKDSMLVLLPVLLNKNHDNCDKIRAVLLYIFGINGT 418

  Fly   452 PESEQERLKEALQAA-GCDLTALAYVQRWK--GIMNRSPSISQATQYEGGGTKTVSMFTKLVSQG 513
            .|...:||...::.. ..|:     ::.|.  |:    |.:..:.|.:.......:..|..:|:.
Mouse   419 TEENLDRLIHNVKIEDDSDM-----IRNWSHLGV----PIVPPSQQAKPLRKDRSAEETFQLSRW 474

  Fly   514 SSFVMEGVKNLVVKR---------HNLPVTKITEQVMECRSNAETDDYLYLDPKLLKGGEVLPKN 569
            :.|:.:.:::.:..|         ...|........:..|....| :||.||   .|.|..|   
Mouse   475 TPFIKDIMEDAIDNRLDSKEWPYCSRCPAVWNGSGAVSARQKPRT-NYLELD---RKNGSRL--- 532

  Fly   570 RAPFQDAVVFMVGGGNYIEYQNLVDFIKQKQTSNVQRRIIYGASTLTNARQFLKELSAL 628
                   ::|::||..|.|.:...:..:..::..|    |.|::.:...|:.|.::..|
Mouse   533 -------IIFVIGGITYSEMRCAYEVSQAHKSCEV----IIGSTHILTPRKLLDDIKML 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlhNP_995614.1 Sec1 33..624 CDD:460020 126/634 (20%)
Stxbp3NP_035634.1 Mediates interaction with DOC2B. /evidence=ECO:0000269|PubMed:17548353 1..255 56/249 (22%)
Sec1 33..576 CDD:460020 126/634 (20%)

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