DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slh and sly-1

DIOPT Version :9

Sequence 1:NP_001137769.2 Gene:Slh / 33434 FlyBaseID:FBgn0264978 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_499317.2 Gene:sly-1 / 185707 WormBaseID:WBGene00009654 Length:675 Species:Caenorhabditis elegans


Alignment Length:660 Identity:294/660 - (44%)
Similarity:433/660 - (65%) Gaps:52/660 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLRERQINAIKQMLNLNSQQPKALAAEPVWKILIYDRVGQDIISPIISIKELRELGVTLHVQLHS 67
            ::|.|||.|::.|:|||.....:...|||||:|:.||.|||||||::.:|:|||||||||:.:.:
 Worm     7 SVRTRQIVALRTMINLNEPVVNSGVREPVWKVLVLDRTGQDIISPLLPVKQLRELGVTLHLLIGA 71

  Fly    68 DRDSIPDVPAIYFCLPTDENLDRIQQDFSSGLYDVYHLNFLAPITRSKIENLAAAALHAGCVANI 132
            .|:.:.||||:||..|.|||:|.:.:|....:||.::.||::|:.|.::|:||:||:|.|.|:.:
 Worm    72 RREPLTDVPAVYFVSPNDENIDLMSEDLKKAMYDSFYCNFISPLARPRLESLASAAVHGGAVSQV 136

  Fly   133 HRVYDQYVNFISLEDDFFIL-KHQQSDQLSYYAINRANTRDEEMEALMDSIVDSLFALFVTLGNV 196
            .:|.|||:||||||||.|:| ::.::...||:|:|...|.|..:.|::|||.|.|||:..|:|.|
 Worm   137 QKVVDQYLNFISLEDDLFVLRRYSENSTFSYHAMNSPGTSDVAVNAMLDSIADGLFAVCATMGIV 201

  Fly   197 PIIRCPRNSAAEMVARKLEKKLRENLWDARANLFHMDATQAGGGVFSFQRPVLLLLDRNMDLATP 261
            ||||||:.:||||||:||::|||:||.|:|.|||.||..:.  |:....||:|::.||:.||||.
 Worm   202 PIIRCPKGNAAEMVAKKLDQKLRDNLRDSRNNLFTMDGVRM--GLLQTSRPLLVIGDRSADLATM 264

  Fly   262 LHHTWSYQALVHDVLDLGLNLVYVEDETASAGARKKPKACDLDR----NDRFWMTHKGSPFPTVA 322
            |||||:||||:||||:|..|.|.:  .|:|.|.:|     |.|.    :|:.|..||||.|||||
 Worm   265 LHHTWTYQALMHDVLELDQNRVTI--STSSTGKKK-----DYDMATGGSDKLWNNHKGSAFPTVA 322

  Fly   323 EAIQEELESYRNSEEEIKRLKTSMGIEGESDIA----FSLVNDTTARLTNAVNSLPQLMEKKRLI 383
            ||:||.|:.||:.|::||::|.::|:.|||:.|    .:::.||||:|.:.|.|||.|:|.||||
 Worm   323 EAVQENLDDYRSKEDDIKKIKQALGLSGESEAADEALTNVLADTTAKLGSTVMSLPDLLESKRLI 387

  Fly   384 DMHTKIATAILNFIKARRLDSFFEIEEKVMSKQTLDRPLLDLLRDGEFGQAEDKLRLYIIYFICA 448
            |:||.|||.:|:.||.|:||..||:|:|::....||:|:...|  ......||.||:.||.|:|.
 Worm   388 DLHTNIATTLLDVIKERKLDVLFELEQKLLQHSPLDQPVTQFL--SNINHQEDVLRVLIIAFLCQ 450

  Fly   449 QQLPESEQERLKEALQAAGCDLTALAYVQRWKGIM---NRSPSISQATQYEGGGTKTVSMFTKLV 510
            :.:.::..:::...|:..|.:.:||.:||:.|.|.   :|:.:.:...:::|.||||:|||.||:
 Worm   451 ETVNQNGYDQMMNLLRERGIEESALKHVQKLKSISQLGSRAANSAHTEEHQGAGTKTISMFGKLL 515

  Fly   511 SQGSSFVMEGVKNLVVKRHNLPVTK-------------------ITEQVMECRSNAETDD-YLYL 555
            |..|.||||||||||.|.||||:||                   |.:.:.......:.|| |.:.
 Worm   516 SHSSKFVMEGVKNLVPKEHNLPLTKMIDSLNTPPSSTGISSAVGINQMIGGSSQGPDIDDIYCFF 580

  Fly   556 DPKLL----KGGEVLPKNRAPFQDAVVFMVGGGNYIEYQNLVDFIKQKQTSNVQRRIIYGASTLT 616
            ||||:    |...:|.:.::. ||.::|:||||||:|||||||:.|:|..    .|:.||.:.|.
 Worm   581 DPKLMHQPTKETILLARQQSA-QDVILFVVGGGNYVEYQNLVDYGKRKNL----MRVTYGCTELV 640

  Fly   617 NARQFLKELS 626
            |..||..::|
 Worm   641 NPAQFCDQVS 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SlhNP_001137769.2 Sec1 1..630 CDD:301618 294/660 (45%)
sly-1NP_499317.2 Sec1 7..650 CDD:301618 293/658 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156577
Domainoid 1 1.000 527 1.000 Domainoid score I142
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5650
Inparanoid 1 1.050 554 1.000 Inparanoid score I604
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53926
OrthoDB 1 1.010 - - D168850at33208
OrthoFinder 1 1.000 - - FOG0004255
OrthoInspector 1 1.000 - - oto18912
orthoMCL 1 0.900 - - OOG6_101825
Panther 1 1.100 - - LDO PTHR11679
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1350
SonicParanoid 1 1.000 - - X3513
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.940

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