DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and GDF3

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_065685.1 Gene:GDF3 / 9573 HGNCID:4218 Length:364 Species:Homo sapiens


Alignment Length:297 Identity:85/297 - (28%)
Similarity:141/297 - (47%) Gaps:56/297 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 LHFDVKSIPADEKLKAAELQLTRDALSQQVVASRSSAN-RTRYQVLVYDITRVGVRGQREPS--- 365
            |:|::.:|...|:|..|:|.|.        :...|..| ....::.::.:....|.||..|.   
Human   109 LYFNLSAIKEREQLTLAQLGLD--------LGPNSYYNLGPELELALFLVQEPHVWGQTTPKPGK 165

  Fly   366 -YLLLDTK----TVRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPHHH----- 420
             ::|....    .|..|..| |:.|       |..:|::|:||.:|:..........:..     
Human   166 MFVLRSVPWPQGAVHFNLLD-VAKD-------WNDNPRKNFGLFLEILVKEDRDSGVNFQPEDTC 222

  Fly   421 VRLRRSADEAHERWQHKQPLLFTYTDDGRHKARSIRDVSGGEGGGKGGRNKRQPRRPTRRKNHDD 485
            .|||.|.        |...|:.|...|..|.:|                 ||:...|..:.:..:
Human   223 ARLRCSL--------HASLLVVTLNPDQCHPSR-----------------KRRAAIPVPKLSCKN 262

  Fly   486 TCRRHSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPK 550
            .|.||.|:::|.|:||..||:||.|:.|.||||:|||.|....||:|:|.:|.|::.::| ::|:
Human   263 LCHRHQLFINFRDLGWHKWIIAPKGFMANYCHGECPFSLTISLNSSNYAFMQALMHAVDP-EIPQ 326

  Fly   551 ACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGC 587
            |.|:||:|..::|||.::...|:|::|::|.|..|||
Human   327 AVCIPTKLSPISMLYQDNNDNVILRHYEDMVVDECGC 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 32/152 (21%)
TGFB 487..588 CDD:214556 46/101 (46%)
GDF3NP_065685.1 TGFb_propeptide <109..220 CDD:279078 26/126 (21%)
TGFB 264..364 CDD:214556 46/101 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
32.770

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