DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and GDF5

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_000548.2 Gene:GDF5 / 8200 HGNCID:4220 Length:501 Species:Homo sapiens


Alignment Length:619 Identity:155/619 - (25%)
Similarity:234/619 - (37%) Gaps:165/619 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AWLLLLAVLATFQTIVRVASTEDISQRFIAAIAPVAAHIPLASASGS-------GSGRSGSRSVG 60
            |||.|       :.|..|....|:.||      |......||.|...       ...|.|..|.|
Human    15 AWLDL-------EFICTVLGAPDLGQR------PQGTRPGLAKAEAKERPPLARNVFRPGGHSYG 66

  Fly    61 ASTSTALAKAFNPFSEPASFSDSDKSHRSKTNKKPSKSDANRQFNEVHKPRTDQLENSKNKSKQL 125
            ...:.|.|:|.....:....:...|....|...:|...:.                         
Human    67 GGATNANARAKGGTGQTGGLTQPKKDEPKKLPPRPGGPEP------------------------- 106

  Fly   126 VNKPNHNKMAVKEQRSHHKKSHHHRSHQPKQASASTESHQSSSIESIFVEEPTLVLDREVASINV 190
              ||.|                   ..|.:||:|.|.:.:.                 ::.....
Human   107 --KPGH-------------------PPQTRQATARTVTPKG-----------------QLPGGKA 133

  Fly   191 PANAKAIIAEQGPSTYSKEALIKDKLKPDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIP-EPMK 254
            |..|.::     ||::    |:|...:|.|.               :.|.:..|...|.| |.|.
Human   134 PPKAGSV-----PSSF----LLKKAREPGPP---------------REPKEPFRPPPITPHEYML 174

  Fly   255 KLYAEIMGHEL----DSVNIPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKSIPAD 315
            .||..:...:.    .||.: :.||    |||:.||..|..  |||.|...:.|..||:.::..|
Human   175 SLYRTLSDADRKGGNSSVKL-EAGL----ANTITSFIDKGQ--DDRGPVVRKQRYVFDISALEKD 232

  Fly   316 EKLKAAELQLTRDALSQQVVASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTV-RLNST 379
             .|..|||::.|...|.....:.....|..      .:........|:|: .|||.::| .|:.:
Human   233 -GLLGAELRILRKKPSDTAKPAAPGGGRAA------QLKLSSCPSGRQPA-ALLDVRSVPGLDGS 289

  Fly   380 DTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPHHHVRLRRSADEAHERWQHKQPLLFTY 444
            .....|:......:..|.|    |.:|:......:......:...|:|.:.||:     .|...:
Human   290 GWEVFDIWKLFRNFKNSAQ----LCLELEAWERGRAVDLRGLGFDRAARQVHEK-----ALFLVF 345

  Fly   445 TDDGRHKARSIRDVSGGEGGGKGGRN--------------------KRQPRRPTRRKNHDDTCRR 489
               ||.|.   ||:...|...:.|::                    .||.:||:  ||....|.|
Human   346 ---GRTKK---RDLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPS--KNLKARCSR 402

  Fly   490 HSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCV 554
            .:|:|:|.|:||||||:|||.|:|::|.|.|.|||..|...|||||:|||:|:|:|...|..|||
Human   403 KALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCV 467

  Fly   555 PTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGCR 588
            ||:|..:::|:::..:.||.|.|::|.|..||||
Human   468 PTRLSPISILFIDSANNVVYKQYEDMVVESCGCR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 50/224 (22%)
TGFB 487..588 CDD:214556 51/100 (51%)
GDF5NP_000548.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..169 36/232 (16%)
TGFb_propeptide 145..344 CDD:279078 54/237 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..265 2/24 (8%)
TGFB 400..501 CDD:214556 51/100 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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