DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpp and Tgfb2

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_112393.2 Gene:Tgfb2 / 81809 RGDID:70491 Length:442 Species:Rattus norvegicus


Alignment Length:432 Identity:108/432 - (25%)
Similarity:171/432 - (39%) Gaps:90/432 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 IKDKLK--------PDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPEPMKKLYA---------E 259
            |..|||        |:|.   |:...::|::|..|.        ::.|...:..|         |
  Rat    44 ILSKLKLTSPPEDYPEPD---EVPPEVISIYNSTRD--------LLQEKASRRAAACERERSDEE 97

  Fly   260 IMGHELDSVNIPK--PG-----LLTKSANTVRSFTHKDSKI-----DDRFPHHHR--FRL-HFDV 309
            ....|:..:::|.  |.     ::|.|:.:|.||..:.|::     |...|..:|  ||: .|||
  Rat    98 YYAKEVYKIDMPSHFPSETVCPVVTTSSGSVGSFCSRQSQVLCGYLDAIPPTFYRPYFRIVRFDV 162

  Fly   310 KSIPAD-EKLKAAELQLTRDALSQQVVASRSSANRTR-YQVL-VYDITRVGVRGQREPSYLLLDT 371
            .::..: ..|..||.::.|    .|...:|.:..|.. ||:| ..|:|        .|:...:|:
  Rat   163 STMEKNASNLVKAEFRVFR----LQNPKARVAEQRIELYQILKSKDLT--------SPTQRYIDS 215

  Fly   372 KTVRLNST-DTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPA----PHHHVRLRRSADEAH 431
            |.|:..:. :.:|.||..||..||....||.|..:.:..     |.    |.::..:...:.|..
  Rat   216 KVVKTRAEGEWLSFDVTDAVHEWLHHKDRNLGFKISLHC-----PCCTFIPSNNYIIPNKSQELE 275

  Fly   432 ERWQHKQPLLFTYTDDGRHKARSIRDVSGG---------------EGGGKGGRNKRQPRRPTRRK 481
            .|:..... ..||....:...:|.|..|.|               |......|.||........:
  Rat   276 ARFAGIDG-TSTYASGDQKTIKSTRKKSSGKTPHLLLMLLPSYRLESQQSSRRRKRALDAAYCFR 339

  Fly   482 NHDDTCRRHSLYVDFS-DVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNP 545
            |..|.|....||:||. |:|| .||..|.||:|.:|.|.||:..:   :.|.|..|.:|.|.:||
  Rat   340 NVQDNCCLRPLYIDFKRDLGW-KWIHEPKGYNANFCAGACPYLWS---SDTQHTKVLSLYNTINP 400

  Fly   546 GKVPKACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGC 587
            ......|||...|:.:.:||... :|..::....|.|..|.|
  Rat   401 EASASPCCVSQDLEPLTILYYIG-NTPKIEQLSNMIVKSCKC 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 54/250 (22%)
TGFB 487..588 CDD:214556 36/102 (35%)
Tgfb2NP_112393.2 TGFb_propeptide 21..256 CDD:395559 56/239 (23%)
TGF_beta_TGFB2 345..441 CDD:381655 35/100 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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