DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and bmp3

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001071233.1 Gene:bmp3 / 777717 ZFINID:ZDB-GENE-030131-7192 Length:452 Species:Danio rerio


Alignment Length:478 Identity:108/478 - (22%)
Similarity:183/478 - (38%) Gaps:152/478 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 YSKEALIKDKL-KPDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPEPMKKLYAEIMGHELDSVN 269
            :||:..:..|. :|:...:.:.|:..||                  |.|:.|||:          
Zfish    32 FSKDVQLGQKAEEPEKQHVKKSEQDTLS------------------EHMQMLYAK---------- 68

  Fly   270 IPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKSIPADEKLKAAELQLTRDALSQQV 334
            ....|...|..||||||......|::|     :.:: |::.|:...|.:.:|.|......|... 
Zfish    69 YTSAGFPLKDGNTVRSFKGHLGTINNR-----QLQI-FNLTSLTKSEDVLSATLHYYIGDLHNS- 126

  Fly   335 VASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRL--NSTDTVS-LDVQPAVDRW--L 394
             :.|.|.:::..|           ...|..:::.||..:..|  |:|.|:. ..:..:...|  :
Zfish   127 -SHRCSKHKSCAQ-----------HNLRRQAHVHLDVWSFSLVKNTTRTIGHFPINISTMHWDFI 179

  Fly   395 ASPQRNYGLLVEVRTVRSLKPAPHHHVRLRRSAD---EAHERWQ----HKQPLLFTYTDDG---- 448
            :...::.     .|.|...|    ||.:|....:   ..|:.|:    .:.|.:..|.:|.    
Zfish   180 SWQWKDI-----TRVVNQAK----HHDQLLIGININSRGHQPWKKLLSDRSPYILVYANDSAISE 235

  Fly   449 ---------RHKARSIRDVSGGEGGGKGG------------------------------------ 468
                     |||:|.:.::...|...:..                                    
Zfish   236 PESVVSTLQRHKSRLLPNLHMLESHNRNASAQHRSRRSTNILLPLQNNELPGPEYPYEIPTWDEA 300

  Fly   469 ------------RNKRQPRRPTRRKN----HDD---------------TCRRHSLYVDFSDVGWD 502
                        |.:::||:..|.||    .|:               .|.|..|.|||:|:||.
Zfish   301 SPYDPMESKTVKRPRKKPRKNPRHKNPLLQFDEQTIKKARKKQWNEPRNCARRYLKVDFADIGWS 365

  Fly   503 DWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMN--PGKVPKACCVPTQLDSVAMLY 565
            :||::|..:|||||.|.|.||:......:|||.:|::|..:.  || :|:.||||.::.|:::|:
Zfish   366 EWIISPKSFDAYYCSGSCQFPMPKSLKPSNHATIQSIVRAVGVVPG-IPEPCCVPEKMSSLSILF 429

  Fly   566 LNDQSTVVLKNYQEMTVVGCGCR 588
            .::...||||.|..|||..|.||
Zfish   430 FDEDKNVVLKVYPNMTVDSCACR 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 44/230 (19%)
TGFB 487..588 CDD:214556 44/102 (43%)
bmp3NP_001071233.1 TGFB 350..452 CDD:214556 44/102 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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