DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and LEFTY2

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_003231.2 Gene:LEFTY2 / 7044 HGNCID:3122 Length:366 Species:Homo sapiens


Alignment Length:408 Identity:88/408 - (21%)
Similarity:139/408 - (34%) Gaps:133/408 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 SLLSLFNMKRPPKIDRS---KIIIPEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSFTHKD 290
            |||....:...|.:||:   |::||..::..|..               ||.:|        |.|
Human    30 SLLRQLQLSEVPVLDRADMEKLVIPAHVRAQYVV---------------LLRRS--------HGD 71

  Fly   291 SKIDDRFPHHHR-------------FRLHFDVKS-IPADEKLKAAELQLTRDALSQQV------V 335
            .....||....|             ..|.|.::. :|.:.:|..|.|:|.::.:.:..      :
Human    72 RSRGKRFSQSFREVAGRFLASEASTHLLVFGMEQRLPPNSELVQAVLRLFQEPVPKAALHRHGRL 136

  Fly   336 ASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDTVSLDVQPAVDRWLASPQRN 400
            :.||:..|...:.|     ||...|....|  |:|::.|.::.:...:.||..||:.|....:..
Human   137 SPRSAQARVTVEWL-----RVRDDGSNRTS--LIDSRLVSVHESGWKAFDVTEAVNFWQQLSRPR 194

  Fly   401 YGLLVEVRTVRSLKPAPHHHVRLRRSADEAHERWQHKQPLLFTYTDDGRHKARSIRDVSGGEGGG 465
            ..||::|...|                       :|..||.     .|.||.  :|..|.|...|
Human   195 QPLLLQVSVQR-----------------------EHLGPLA-----SGAHKL--VRFASQGAPAG 229

  Fly   466 ---------------KGGRNKRQPRRP----TRRKNHDDTCRRHSLYVDFSDVGW-DDWIVAPLG 510
                           .|.:....|..|    ||       |.|..:|:|...:.| .:|::.|.|
Human   230 LGEPQLELHTLDLRDYGAQGDCDPEAPMTEGTR-------CCRQEMYIDLQGMKWAKNWVLEPPG 287

  Fly   511 YDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQ------ 569
            :.||.|.|.|..|            .:.|..|. |...|:. |:.::..|:.|:....:      
Human   288 FLAYECVGTCQQP------------PEALAFNW-PFLGPRQ-CIASETASLPMIVSIKEGGRTRP 338

  Fly   570 STVVLKNYQEMTVVGCGC 587
            ..|.|.|   |.|..|.|
Human   339 QVVSLPN---MRVQKCSC 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 48/237 (20%)
TGFB 487..588 CDD:214556 28/108 (26%)
LEFTY2NP_003231.2 TGFb_propeptide <106..214 CDD:307025 28/142 (20%)
TGF_beta 263..353 CDD:306518 27/106 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.