DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpp and TGFB1

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:XP_011525544.1 Gene:TGFB1 / 7040 HGNCID:11766 Length:391 Species:Homo sapiens


Alignment Length:459 Identity:104/459 - (22%)
Similarity:163/459 - (35%) Gaps:137/459 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 SSIESIFVEEPTLVLDREVASINVPANAKAIIAEQGPSTYSKEALIKDKLKPDPSTLVEIEKSLL 231
            |:.::|.:|   ||..:.:.:|.....:|..:|.. ||        :.::.|.|     :.:::|
Human    31 STCKTIDME---LVKRKRIEAIRGQILSKLRLASP-PS--------QGEVPPGP-----LPEAVL 78

  Fly   232 SLFNMKRPPKIDRSKIIIPEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSFTHKDSKIDDR 296
            :|:|..|......|....|||....||:    |:..|      |:.::.|          :|.|:
Human    79 ALYNSTRDRVAGESAEPEPEPEADYYAK----EVTRV------LMVETHN----------EIYDK 123

  Fly   297 FPHH-HRFRLHFDV----KSIPADEKLKAAELQLTRDAL--SQQV-VASRSSANRTRYQVLVYDI 353
            |... |...:.|:.    :::|....|..|||:|.|..|  .|.| :..:.|.|..||       
Human   124 FKQSTHSIYMFFNTSELREAVPEPVLLSRAELRLLRLKLKVEQHVELYQKYSNNSWRY------- 181

  Fly   354 TRVGVRGQREPSYLLLDTKTVRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPH 418
                          |.:......:|.:.:|.||...|.:||:......|.               
Human   182 --------------LSNRLLAPSDSPEWLSFDVTGVVRQWLSRGGEIEGF--------------- 217

  Fly   419 HHVRLRRSADEAHERWQHKQPLLFTYTDDGRHKARSIRDVSGGEGGGKGG-----RNKRQP---- 474
               ||     .||            .:.|.|.....: |::.|...|:.|     ....:|    
Human   218 ---RL-----SAH------------CSCDSRDNTLQV-DINAGFTTGRRGDLATIHGMNRPFLLL 261

  Fly   475 -RRPTRRKNH-------------------DDTCRRHSLYVDF-SDVGWDDWIVAPLGYDAYYCHG 518
             ..|..|..|                   :..|....||:|| .|:|| .||..|.||.|.:|.|
Human   262 MATPLERAQHLQSSRHRRALDTNYCFSSTEKNCCVRQLYIDFRKDLGW-KWIHEPKGYHANFCLG 325

  Fly   519 KCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVV 583
            .||:..:   ..|.::.|..|.|..|||.....||||..|:.:.::|...:...| :....|.|.
Human   326 PCPYIWS---LDTQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRKPKV-EQLSNMIVR 386

  Fly   584 GCGC 587
            .|.|
Human   387 SCKC 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 46/226 (20%)
TGFB 487..588 CDD:214556 36/102 (35%)
TGFB1XP_011525544.1 TGFb_propeptide 30..262 CDD:395559 65/324 (20%)
TGF_beta_TGFB1 293..391 CDD:381654 36/103 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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