DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and gdf2

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001165057.2 Gene:gdf2 / 563287 ZFINID:ZDB-GENE-100107-1 Length:389 Species:Danio rerio


Alignment Length:450 Identity:132/450 - (29%)
Similarity:187/450 - (41%) Gaps:122/450 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 ESIFVEEPTLVLDREVASINVPANAKAIIAEQGPSTYSKEALIKDKLKPDPSTLVEIEKSLLSLF 234
            :|:|::|..||.|                               |.|....|.|..:::..|...
Zfish    31 DSMFIQEQKLVED-------------------------------DDLNKVESFLGFMKEDFLRKL 64

  Fly   235 NMKRPPKIDRSKIIIPEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSFTHKDSKIDDRFPH 299
            |:...|: :..|:..|:.|.:||..   :..|..:||:       ::.:|||..:|.....|..:
Zfish    65 NLSGVPQ-EHRKVQPPQFMIELYNR---YASDKNSIPR-------SDVIRSFVVQDVIYSIRQGN 118

  Fly   300 HHRFRLHFDVKSIPADEKLKAAELQL---------TRDALSQQVVASRSSANRTRYQVLVYDITR 355
            ..:.||.|:| |||..|::.:.:|:|         ..|.|.       :|.|       |||   
Zfish   119 KTQHRLLFNV-SIPNHEEITSVQLRLFTLWHRHKPACDDLF-------TSIN-------VYD--- 165

  Fly   356 VGVRGQREPSYL-LLDTKTVRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPHH 419
              |..::....| |||.:.||.:.....:.||..||..|..|                       
Zfish   166 --VEYEQNAKILHLLDGRDVRESINTWEAFDVTGAVRIWHES----------------------- 205

  Fly   420 HVRLRRSADEAHERWQH--------------KQPLLFTYTDD-GRHKARSIRDV------SGGEG 463
                ||.|.|.....||              ...::..::|| |..|..|:|.|      ...:.
Zfish   206 ----RRGAGEIQVEVQHSCDSFDISLSLEDNSSAVVIVFSDDLGNRKEESMRKVKEMLVREQQQV 266

  Fly   464 GGKGGRNKRQPRRPTRRKNHDDTCRRHSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHF 528
            |.:...:.|..||  :||..::.|||.||.|:|.|:|||.|||||..||||.|.|.|.|||.|..
Zfish   267 GNQAPVSNRHRRR--KRKAKNNYCRRTSLKVNFKDIGWDKWIVAPPEYDAYECKGVCYFPLTDDV 329

  Fly   529 NSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGCR 588
            :.:.|||:|||||..||.|...||||||:||.:|::|.......|...|:||.|..||||
Zfish   330 SPSRHAVIQTLVNLSNPKKANMACCVPTKLDPIAVMYQEKGVITVRHLYEEMKVAKCGCR 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 52/242 (21%)
TGFB 487..588 CDD:214556 55/100 (55%)
gdf2NP_001165057.2 TGFb_propeptide 60..222 CDD:279078 52/219 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..284 6/22 (27%)
TGF_beta 288..388 CDD:278448 54/99 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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