DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and gdf10a

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:XP_691459.3 Gene:gdf10a / 563003 ZFINID:ZDB-GENE-090312-17 Length:441 Species:Danio rerio


Alignment Length:425 Identity:101/425 - (23%)
Similarity:178/425 - (41%) Gaps:112/425 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 IPEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRL-------- 305
            :.:.|.|||        :..| .:|..| |..||||||..|...::.|.  .:|..|        
Zfish    44 LSQHMYKLY--------EKYN-TEPNRL-KEGNTVRSFKAKPENVEQRV--SYRLNLTSLQGSEV 96

  Fly   306 ------HFDVKSIPAD-----EKLKAAELQLTRDAL--SQQVVASRSSAN--------------- 342
                  ||.....|..     ::.|....::|...|  |.:::....|.|               
Zfish    97 ILSSTFHFFFDKRPRQRSWFCKRFKNPSCRITNFPLLPSIRLLFRSPSVNSTTGSLLGNLTVVPH 161

  Fly   343 -----------------RTRYQVLV-----YDITRVGVRGQREPS---YLLLDTKTVRLNSTDTV 382
                             |.|.|:|:     |.......:.|..||   |||:....:.::..::|
Zfish   162 RRGTWQSKDVSVIMKEARDRNQLLITLEFDYGEQYQRYQDQLSPSTLPYLLVYANDLAISEPNSV 226

  Fly   383 SL----------DVQPAVDRWLASPQRNYGLLVEVRTVRSLK-----PAPHHHV-RLRRSADEAH 431
            ::          |.|||     .||..:    .::|..|.|:     |..::.: .:..::.:.|
Zfish   227 AVSLQRYDPFIGDQQPA-----QSPDSS----PDIRVKRELELDFTDPIENNELPEVEYNSFKQH 282

  Fly   432 ERWQHK----QPLLFTYTDDGRHKARSIRDVSGGEGGGKGGRNKRQPRRPTRRKNHDD--TCRRH 490
            :.|:..    :|..|.     :.:.|..::.:.|.|..:..|...:..:..||:...:  :|.|.
Zfish   283 DMWESAYYPLKPKPFK-----KERRRKGQEHTDGFGKSQVLRFDEKTMKKARRRQWKEPRSCSRR 342

  Fly   491 SLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMN--PGKVPKACC 553
            .|.|||:|:||::||::|..:||:||.|.|.||:......:|||.:|::|..:.  || :|:.||
Zfish   343 YLKVDFADIGWNEWILSPKSFDAFYCAGTCEFPIPKVVRPSNHATIQSIVKAVGIIPG-IPEPCC 406

  Fly   554 VPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGCR 588
            ||.::..:::|::::...:|||.|..|:|..|.||
Zfish   407 VPEKMKPLSVLFVDESKNIVLKIYPNMSVETCACR 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 53/275 (19%)
TGFB 487..588 CDD:214556 40/102 (39%)
gdf10aXP_691459.3 TGF_beta 337..440 CDD:278448 40/103 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.