DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpp and Lefty1

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001102550.1 Gene:Lefty1 / 498299 RGDID:1561867 Length:368 Species:Rattus norvegicus


Alignment Length:393 Identity:86/393 - (21%)
Similarity:146/393 - (37%) Gaps:101/393 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 SLLSLFNMKRPPKIDRSKI---IIPEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSFTHKD 290
            |||....:.|||.:|::.:   :||..::..|..::.|..|            |.:..:.|:...
  Rat    30 SLLQQLRLDRPPVLDKADVEGMVIPSHVRAQYVALLQHSHD------------SRSRGKRFSQNF 82

  Fly   291 SKIDDRF------PHHHRFRLHFDVKSIPADEKLKAAELQL-----TRDALSQQVVASRSSANRT 344
            .::..||      .|...|.:.   :.:|.:.:|..|.|:|     .|.||.:|   .|.|.:..
  Rat    83 REVAGRFLVSETSSHLLVFGME---QRLPPNSELVQAVLRLFQEPVPRTALRRQ---KRLSPHSA 141

  Fly   345 RYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRT 409
            |.:|.: :..|....|....:  |:|::.|.::.:.....||..||:.|....:....||::|..
  Rat   142 RARVTI-EWLRFREDGSNRTA--LIDSRLVSIHESGWKVFDVTEAVNFWQQLSRPRQPLLLQVSV 203

  Fly   410 VRS-LKPAP-HHHVRLRRSADEAHERWQHKQPLLFTYTDDGRHKARSIRDVSGGEGGGKGGRNKR 472
            .|. |.|.. ..|..:|.:|....:.....:|.|..:|.|       ::|.        |.:...
  Rat   204 QREHLGPGTWSAHKLVRFAAQGTPDGKGLGEPQLELHTLD-------LKDY--------GAQGNC 253

  Fly   473 QPRRPTRRKNHDDTCRRHSLYVDFSDVGW-DDWIVAPLGYDAYYCHGKC-----------PFPLA 525
            .|..|.   .....|.|..:|:|...:.| ::||:.|.|:..|.|.|.|           ||   
  Rat   254 DPETPV---TEGTRCCRQEMYLDLQGMKWAENWILEPPGFLTYECVGSCLQPPESLTIRWPF--- 312

  Fly   526 DHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAML--YLNDQST----VVLKNYQEMTVVG 584
                             :.|.:     ||.:::.|:.::  ...|..|    |.|.|   |.|..
  Rat   313 -----------------LGPRQ-----CVASEMTSLPLIVSIKEDGRTRPQVVSLPN---MRVQR 352

  Fly   585 CGC 587
            |.|
  Rat   353 CSC 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 52/230 (23%)
TGFB 487..588 CDD:214556 28/119 (24%)
Lefty1NP_001102550.1 TGFb_propeptide 29..211 CDD:413528 46/201 (23%)
TGF_beta_LEFTY1_2 264..355 CDD:381636 27/118 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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