DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpp and nodal3.1

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_988864.1 Gene:nodal3.1 / 394458 XenbaseID:XB-GENE-5964399 Length:401 Species:Xenopus tropicalis


Alignment Length:442 Identity:101/442 - (22%)
Similarity:172/442 - (38%) Gaps:130/442 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 SLLSLF--------NMKRPPKIDRSKII----------------------IPEPMKKLYAEIMG- 262
            :.||||        .|..||.:...|.|                      .|..|.:||..|:. 
 Frog     2 AFLSLFLCLVFSSPLMAMPPALQGRKAISPASILKGPSTDNGARDFHGRKFPHFMMQLYQNIISR 66

  Fly   263 HELDSVNIPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKSIPADEKLKAAELQL-- 325
            .:.|..|:..|.|  :.::||:||..|......     :.:.|.||:.||..:.:||.|||::  
 Frog    67 RDKDLSNLEHPTL--QESDTVQSFIAKSYTTVG-----NHWTLFFDMSSISTNNELKLAELRICL 124

  Fly   326 ---------------TRDALSQQVVASRSS--ANRTRYQVLVYDITRVGVRGQREPSYLLLDTKT 373
                           |:|...:..:.|..:  ::.......|:::|.|      ..:||:...:.
 Frog   125 PSFGKSHSVTVEIYHTKDTKEKLFMGSFKTKISSALDADCKVFNLTMV------LHNYLIRGKRL 183

  Fly   374 VRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVE----------VRTVRSLKPAPHHHVRLRRSAD 428
            ::               |.::.:.    |||:.          ...|.:||...||   :...|.
 Frog   184 IK---------------DEYIQAK----GLLLRDLEKSAAEKGAENVDTLKQDKHH---VSDFAA 226

  Fly   429 E-------AHERWQHKQ----------PLLFTYTDDGRHKARSIRDVSGGEGGGKGGRNKRQPRR 476
            |       |.||.|.|.          ||.:...|:. :|....|.:.         |||::..|
 Frog   227 ERIILVVFAKERSQAKPDPPSLGKQLFPLKYGMADNA-NKVNGFRRLR---------RNKKEKTR 281

  Fly   477 -------PTRRKNHDDTCRRHSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHA 534
                   |...:.....||:..::|||..:||..|||.|..|:||.|...|..||.:..::||::
 Frog   282 MDVGTTPPKPVEEIKPKCRKVDMFVDFQKIGWGSWIVYPKAYNAYRCESACAVPLNETDDATNYS 346

  Fly   535 VVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCG 586
            .:::|:...:..:.....|||.::.|::|||..::. .:|::::||.|..||
 Frog   347 YIKSLLPLSDTERRECPSCVPVKMRSMSMLYYENEE-FILRHHEEMIVEECG 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 59/291 (20%)
TGFB 487..588 CDD:214556 34/100 (34%)
nodal3.1NP_988864.1 TGFb_propeptide 53..>139 CDD:279078 24/92 (26%)
TGFB 299..397 CDD:214556 32/98 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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