DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and GDF6

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001001557.1 Gene:GDF6 / 392255 HGNCID:4221 Length:455 Species:Homo sapiens


Alignment Length:411 Identity:123/411 - (29%)
Similarity:172/411 - (41%) Gaps:97/411 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 KRPPKIDRSKIIIP-EPMKKLY-----AEIMGHELDSVNIPKPGLLTKSANTVRSFTHKDSKIDD 295
            :.||  .|...::| |.|..:|     ||.:|.......      .:|||||:.||.  |..:||
Human    83 QEPP--GRGPRVVPHEYMLSIYRTYSIAEKLGINASFFQ------SSKSANTITSFV--DRGLDD 137

  Fly   296 RFPHH--HRFRLHFDVKSIPADEKLKAAELQLTRDALSQQVVASRSSANRTRYQVLVYDITRVGV 358
             ..|.  .|.:..|||..:...|:|..|||:|.|.|.|..........:...:..|         
Human   138 -LSHTPLRRQKYLFDVSMLSDKEELVGAELRLFRQAPSAPWGPPAGPLHVQLFPCL--------- 192

  Fly   359 RGQREPSYLLLDTKTVRLNSTDTVSLDVQPA-------VDRWLA---SPQRNYGLLVEVRT---- 409
                  |.||||.:|          ||.|.|       .|.|..   .|.:.  |.:|:|.    
Human   193 ------SPLLLDART----------LDPQGAPPAGWEVFDVWQGLRHQPWKQ--LCLELRAAWGE 239

  Fly   410 -------VRSLKPAPHHHVRLRRSADEAHERWQHKQPLLFTYTDDGRHK--ARSIRDVSGGEGGG 465
                   .|:..|.......||........|...::.||..:|...|..  |.....:...|..|
Human   240 LDAGEAEARARGPQQPPPPDLRSLGFGRRVRPPQERALLVVFTRSQRKNLFAEMREQLGSAEAAG 304

  Fly   466 KG-----------------------GRNKRQPRRPTRR-KNHDD----TCRRHSLYVDFSDVGWD 502
            .|                       ||.:|:....:|. |.|..    .|.:..|:|:|.::|||
Human   305 PGAGAEGSWPPPSGAPDARPWLPSPGRRRRRTAFASRHGKRHGKKSRLRCSKKPLHVNFKELGWD 369

  Fly   503 DWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLN 567
            |||:|||.|:||:|.|.|.|||..|...||||::|||:|:|:||..|.:|||||:|..:::||::
Human   370 DWIIAPLEYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYID 434

  Fly   568 DQSTVVLKNYQEMTVVGCGCR 588
            ..:.||.|.|::|.|..||||
Human   435 AGNNVVYKQYEDMVVESCGCR 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 58/235 (25%)
TGFB 487..588 CDD:214556 51/100 (51%)
GDF6NP_001001557.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..93 3/11 (27%)
TGFb_propeptide 79..281 CDD:395559 58/235 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 244..267 4/22 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..351 9/50 (18%)
TGF_beta_GDF5_6_7 354..455 CDD:381644 51/100 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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