DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and spaw

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_851298.1 Gene:spaw / 338101 ZFINID:ZDB-GENE-030219-1 Length:404 Species:Danio rerio


Alignment Length:396 Identity:101/396 - (25%)
Similarity:166/396 - (41%) Gaps:100/396 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 PEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSFTHKDSKI-----DDRFPHHHRFRLHFDV 309
            |..|.:||.:..|::          :||..|:......|:...:     .|......|:.:.||:
Zfish    50 PLYMMQLYRDFSGNK----------MLTTPASVDNPALHQSDFVLSLIAQDCHQTEERWTVSFDM 104

  Fly   310 KSIPADEKLKAAELQLTRDALS-------------QQVVASRSSANRTRYQVLVYDITRVGVRGQ 361
            .|:.|.:.::.:||::...|.|             :|..||.|...|.: ::.:..:..|.| .|
Zfish   105 SSLSASDNIQLSELRIRLPAFSASRRVTVDIFHQHKQHCASDSVFCRNK-KLFLGSVKSVDV-SQ 167

  Fly   362 REPSYLLLD-TKTVR---LNSTDTVSLDVQPAVDR-----------------W---LASPQRNYG 402
            ...|:.:.: |:.::   :...||......|..|:                 |   :..|.....
Zfish   168 SSSSWRVFNITELLQQWLIQGMDTPDRVTAPDYDQGSGSGSGDDFIESLTSSWPRKIQHPTAERV 232

  Fly   403 LLVE-------------VRTVRSLKPAPHHHVRLRRSADEAHERWQHKQPLL--FTYTDDGRHKA 452
            ::|.             :.||...|     :|.|.|.||....| :||:..:  ...|||     
Zfish   233 MIVVFYKETVTHSASSLMNTVAQSK-----YVTLNRPADGTQGR-RHKRNRVERMRMTDD----- 286

  Fly   453 RSIRDVSGGEGGGKGGRNKRQPRRPT-RRKNHDDTCRRHSLYVDFSDVGWDDWIVAPLGYDAYYC 516
               |:|:|               :|| ..:.....|||..::|||..:|||:|||.|..|:||.|
Zfish   287 ---RNVTG---------------KPTPSEEQQASLCRRVDMWVDFDQIGWDEWIVHPKRYNAYRC 333

  Fly   517 HGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQSTVVLKNYQEMT 581
            .|:||.||.:.:|.||||.:|:|:....|.:|....|||.:|.|::|||..... ||::::::|.
Zfish   334 EGECPSPLDETYNPTNHAYMQSLLKLYQPERVSCPSCVPLRLSSLSMLYYEGDG-VVMRHHEDMI 397

  Fly   582 VVGCGC 587
            |..|||
Zfish   398 VEECGC 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 47/250 (19%)
TGFB 487..588 CDD:214556 46/101 (46%)
spawNP_851298.1 TGFb_propeptide 50..188 CDD:366248 29/149 (19%)
TGF_beta_NODAL 302..404 CDD:381637 46/103 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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