DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Lefty2

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_796073.1 Gene:Lefty2 / 320202 MGIID:2443573 Length:368 Species:Mus musculus


Alignment Length:402 Identity:79/402 - (19%)
Similarity:143/402 - (35%) Gaps:111/402 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 EIEKSLLSLFNMKRPPKIDRS---KIIIPEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSF 286
            ::..|||....:.:.|.:|.:   ::.||..::..|..::                       ..
Mouse    26 QVLSSLLQQLQLSQAPTLDSADVEEMAIPTHVRSQYVALL-----------------------QG 67

  Fly   287 THKDSKIDDRFPHHHR-------------FRLHFDVKS-IPADEKLKAAELQLTRDALSQQVVA- 336
            :|.|.....||..:.|             ..|.|.::. :|.:.:|..|.|:|.::.:.:..:. 
Mouse    68 SHADRSRGKRFSQNFREVAGRFLMSETSTHLLVFGMEQRLPPNSELVQAVLRLFQEPVPRTALRR 132

  Fly   337 -SRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDTVSLDVQPAVDRWLASPQRN 400
             .|.|.:..|.:|.: :..||...|....:  |:|::.|.::.:...:.||..||:.|....:..
Mouse   133 FERLSPHSARARVTI-EWLRVREDGSNRTA--LIDSRLVSIHESGWKAFDVTEAVNFWQQLSRPR 194

  Fly   401 YGLLVEVRTVRS-LKPAP-HHHVRLRRSADEAHERWQHKQPLLFTYTDDGRHKARSIRDVSGGEG 463
            ..||::|...|. |.|.. ..|..:|.:|....:.....:|.|..:|.|       ::|.     
Mouse   195 QPLLLQVSVQREHLGPGTWSAHKLVRFAAQGTPDGKGQGEPQLELHTLD-------LKDY----- 247

  Fly   464 GGKGGRNKRQPRRPTRRKNHDDTCRRHSLYVDFSDVGW-DDWIVAPLGYDAYYCHGKC------- 520
               |.:....|..|.   .....|.|..:|:|...:.| ::||:.|.|:..|.|.|.|       
Mouse   248 ---GAQGNCDPEVPV---TEGTRCCRQEMYLDLQGMKWAENWILEPPGFLTYECVGSCLQLPESL 306

  Fly   521 ----PFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQ------STVVLK 575
                ||                    :.|.:     ||.:::.|:.|:....:      ..|.|.
Mouse   307 TIGWPF--------------------LGPRQ-----CVASEMTSLPMIVSVKEGGRTRPQVVSLP 346

  Fly   576 NYQEMTVVGCGC 587
            |   |.|..|.|
Mouse   347 N---MRVQTCSC 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 46/239 (19%)
TGFB 487..588 CDD:214556 27/119 (23%)
Lefty2NP_796073.1 TGFb_propeptide <106..211 CDD:279078 25/107 (23%)
TGF_beta 263..355 CDD:278448 26/119 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.