DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and bmp2b

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_571435.1 Gene:bmp2b / 30632 ZFINID:ZDB-GENE-980526-474 Length:411 Species:Danio rerio


Alignment Length:403 Identity:165/403 - (40%)
Similarity:225/403 - (55%) Gaps:65/403 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 KPDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPEPMKKLYAEIMGHELDSVNIPKP-------- 273
            :.|.:.|.|.|..||::|.:||.|...:| .::|:.|..||  .|..|.|..||.:|        
Zfish    43 RTDTNFLNEFELRLLNMFGLKRKPTPSKS-AVVPQYMLDLY--YMHSENDDPNIRRPRSTMGKHV 104

  Fly   274 GLLTKSANTVRSFTHKDS---------KIDDRFPHHHRFRLHFDVKSIPADEKLKAAELQLTRDA 329
            ......|||:|||.|:::         |...:|        .|::.|||.:|.:.||||::.|| 
Zfish   105 ERAASRANTIRSFHHEEAFEALSSLKGKTTQQF--------FFNLTSIPGEELISAAELRIFRD- 160

  Fly   330 LSQQVVASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDTVSLDVQPAVDRWL 394
               ||:...|::.  .:::.:|::.|..:...:||...||||:.|:.:.|...|.||..||.||.
Zfish   161 ---QVLGDASTSG--FHRINIYEVFRPALAPSKEPLTRLLDTRLVQDSHTRWESFDVGSAVARWA 220

  Fly   395 ASPQRNYGLLVEVRTVRSLKPAP-----------HHHVRLRRSADEAHERWQHKQPLLFTYTDDG 448
            ...|.|:||||||     |.|..           ..|||:.||.....:.|...:|||.||:.||
Zfish   221 RESQHNHGLLVEV-----LHPKESEVSEEAESNRRKHVRVSRSLHADEDSWAQARPLLVTYSHDG 280

  Fly   449 RHKARSIRDVSGGEGGGKGGRNKRQPRR--PTRRKNHD-DTCRRHSLYVDFSDVGWDDWIVAPLG 510
            :           |.......|.|||.||  ..|||:|. ..||||:||||||||||::|||||.|
Zfish   281 Q-----------GTAVLHSNREKRQARRGQKPRRKHHQRSNCRRHALYVDFSDVGWNEWIVAPPG 334

  Fly   511 YDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQSTVVLK 575
            |.|:||||:|||||.||.||||||:||||||::| ..:|||||:||:|..:::|||::...|:||
Zfish   335 YHAFYCHGECPFPLPDHLNSTNHAIVQTLVNSVN-SNIPKACCIPTELSPISLLYLDEYEKVILK 398

  Fly   576 NYQEMTVVGCGCR 588
            |||:|.|.|||||
Zfish   399 NYQDMVVEGCGCR 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 78/246 (32%)
TGFB 487..588 CDD:214556 68/100 (68%)
bmp2bNP_571435.1 TGFb_propeptide 49..276 CDD:366248 79/248 (32%)
TGF_beta_BMP2_like 311..411 CDD:381638 68/100 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 177 1.000 Domainoid score I3545
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H926
Inparanoid 1 1.050 273 1.000 Inparanoid score I2952
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002405
OrthoInspector 1 1.000 - - otm24629
orthoMCL 1 0.900 - - OOG6_105711
Panther 1 1.100 - - LDO PTHR11848
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3241
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.890

Return to query results.
Submit another query.