DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Bmp2

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_058874.2 Gene:Bmp2 / 29373 RGDID:2211 Length:394 Species:Rattus norvegicus


Alignment Length:416 Identity:165/416 - (39%)
Similarity:226/416 - (54%) Gaps:63/416 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 AKAIIAEQGPSTYSKEALIKDKLKPDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPEPMKKLYA 258
            |..:|.|.|...:: .|..:...:|....|.|.|..|||:|.:|:.|...:. :::|..|..||.
  Rat    21 AAGLIPELGRKKFA-GASGRPLSRPSDDVLSEFELRLLSMFGLKQRPTPSKD-VVVPPYMLDLYR 83

  Fly   259 EIMG--------HELDSVNIPKPGLLTKSANTVRSFTHKDS---------KIDDRFPHHHRFRLH 306
            ...|        |.|:..        ...|||||||.|:::         |...||        .
  Rat    84 RHSGQPGAPAPDHRLERA--------ASRANTVRSFHHEEAIEELPEMSGKTSRRF--------F 132

  Fly   307 FDVKSIPADEKLKAAELQLTRDALSQQVVASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDT 371
            |::.|:|.||.|.:||||:.|:.: |:.:.:.|..:|    :.:|:|.:......:.|...||||
  Rat   133 FNLSSVPTDEFLTSAELQIFREQM-QEALGNSSFQHR----INIYEIIKPATASSKFPVTRLLDT 192

  Fly   372 KTVRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPHHHVRLRRSADEAHERWQH 436
            :.|..|::...|.||.|||.||.|....|:|.:|||..:.........|||:.||..:....|..
  Rat   193 RLVTQNTSQWESFDVTPAVMRWTAQGHTNHGFVVEVAHLEEKPGVSKRHVRISRSLHQDEHSWSQ 257

  Fly   437 KQPLLFTYTDDGR----HKARSIRDVSGGEGGGKGGRNKRQPRRPTRRKNHDDTCRRHSLYVDFS 497
            .:|||.|:..||:    ||                 |.|||.:. .:||....:|:||.||||||
  Rat   258 VRPLLVTFGHDGKGHPLHK-----------------REKRQAKH-KQRKRLKSSCKRHPLYVDFS 304

  Fly   498 DVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVA 562
            ||||:||||||.||.|:||||:||||||||.||||||:||||||::| .|:||||||||:|.:::
  Rat   305 DVGWNDWIVAPPGYHAFYCHGECPFPLADHLNSTNHAIVQTLVNSVN-SKIPKACCVPTELSAIS 368

  Fly   563 MLYLNDQSTVVLKNYQEMTVVGCGCR 588
            ||||::...|||||||:|.|.|||||
  Rat   369 MLYLDENEKVVLKNYQDMVVEGCGCR 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 72/235 (31%)
TGFB 487..588 CDD:214556 73/100 (73%)
Bmp2NP_058874.2 TGFb_propeptide 41..265 CDD:395559 74/245 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..291 9/39 (23%)
TGF_beta_BMP2 292..394 CDD:381660 73/102 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 176 1.000 Domainoid score I3523
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H926
Inparanoid 1 1.050 279 1.000 Inparanoid score I2839
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002405
OrthoInspector 1 1.000 - - otm44920
orthoMCL 1 0.900 - - OOG6_105711
Panther 1 1.100 - - LDO PTHR11848
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X157
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1110.860

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