DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Mstn

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_062024.1 Gene:Mstn / 29152 RGDID:3115 Length:376 Species:Rattus norvegicus


Alignment Length:414 Identity:96/414 - (23%)
Similarity:151/414 - (36%) Gaps:137/414 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 STLVEIEKSLLSLFNMKRPPKIDRSKI--IIPE--PMKKLYAEIMGHELDSVNIPKPGLLTKSAN 281
            |.:..|:..:||...::..|.|.:..|  ::|.  |:::|        :|..::.          
  Rat    52 SRIEAIKIQILSKLRLETAPNISKDAIRQLLPRAPPLREL--------IDQYDVQ---------- 98

  Fly   282 TVRSFTHKDSKIDDRFPHHHRFRLHFDVKSI-----------PADEKLK------AAELQLTRDA 329
              |..:...|..||.:        |...::|           .||.|.|      ::::|..:..
  Rat    99 --RDDSSDGSLEDDDY--------HATTETIITMPTESDFLMQADGKPKCCFFKFSSKIQYNKVV 153

  Fly   330 LSQQVVASRSSANRTR--YQVL-----VYDITR-VGVRGQREPSYLLLDTKTVRLNSTDT---VS 383
            .:|..:..|:....|.  .|:|     :.|.|| .|:|.      |.||.      |..|   .|
  Rat   154 KAQLWIYLRAVKTPTTVFVQILRLIKPMKDGTRYTGIRS------LKLDM------SPGTGIWQS 206

  Fly   384 LDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPHHHVRLRRSADE-AHERWQHKQPLLFTYTDD 447
            :||:..:..||..|:.|.|  :|::.:                 || .|:       |..|:   
  Rat   207 IDVKTVLQNWLKQPESNLG--IEIKAL-----------------DENGHD-------LAVTF--- 242

  Fly   448 GRHKARSIRDVSGGEGGGKGGRN-------KRQPRRPTR-------RKNHDDTCRRHSLYVDFSD 498
                          .|.|:.|.|       ...|:|..|       ..:.:..|.|:.|.|||..
  Rat   243 --------------PGPGEDGLNPFLEVKVTDTPKRSRRDFGLDCDEHSTESRCCRYPLTVDFEA 293

  Fly   499 VGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAM 563
            .|| |||:||..|.|.||.|:|.|.....:..|:      ||:..||......||.||::..:.|
  Rat   294 FGW-DWIIAPKRYKANYCSGECEFVFLQKYPHTH------LVHQANPRGSAGPCCTPTKMSPINM 351

  Fly   564 LYLNDQSTVVLKNYQEMTVVGCGC 587
            ||.|.:..::......|.|..|||
  Rat   352 LYFNGKEQIIYGKIPAMVVDRCGC 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 49/251 (20%)
TGFB 487..588 CDD:214556 38/101 (38%)
MstnNP_062024.1 TGFb_propeptide 37..250 CDD:413528 53/280 (19%)
TGF_beta_GDF8 269..376 CDD:381658 38/114 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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