DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Gdf2

DIOPT Version :10

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001099566.1 Gene:Gdf2 / 290921 RGDID:1586196 Length:430 Species:Rattus norvegicus


Alignment Length:448 Identity:131/448 - (29%)
Similarity:188/448 - (41%) Gaps:105/448 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 NAKAIIAEQGPSTYSKEALIKDKLKPDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPEPMKKLY 257
            ||::.:...|    |:|..:.| ||   ..|..::...|...|:...|..|:::...|:.|..||
  Rat    36 NARSSLGLSG----SREEGVFD-LK---MFLENMKVDFLRSLNLSGIPSQDKTRAEPPQYMIDLY 92

  Fly   258 AEIMGHELDSVNIPKPGLLTKSANTVRSFTHKD---SKIDDRFPHHHRFRLH---FDVKSIPADE 316
            ..   :..|..:.|       ::|.||||:.:|   :...:.||    |:.|   |:: |||..|
  Rat    93 NR---YTTDKSSTP-------ASNIVRSFSVEDAISTAATEDFP----FQKHILIFNI-SIPRHE 142

  Fly   317 KLKAAELQLTRDALSQQVVASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDT 381
            ::..|||:|.....:..........|...|.||..|.|.....|          |||. |.|.|.
  Rat   143 QITRAELRLYVSCQNHVDSTHGLEGNMVVYDVLDVDETWDSASG----------TKTF-LVSQDI 196

  Fly   382 -----VSLDVQPAVDRWLASPQRNYGLLVEVRTVR----------SLKPAPHH------------ 419
                 .:|:|..||.||:.:........:||...|          |:.|...:            
  Rat   197 QDEGWETLEVSSAVKRWVRADSTTNKNKLEVTVQRHREGCSTLDISVPPGSQNLPFFVVFSNDRS 261

  Fly   420 ----HVRLRRSADEAHERWQHKQPLLFTYTDDGRHKARSIRDVSGGEGGGKGGRNKRQPRR---- 476
                ..||     |..|...|:|..:...|....::              :.|.::.:..|    
  Rat   262 NGTKETRL-----ELKEMIGHEQETVLVKTSKNAYQ--------------EAGESREEEERIDGY 307

  Fly   477 ----P--TRRKNH----DDTCRRHSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNST 531
                |  .|||..    ...|::.||.|:|.|:|||.||:||..||||.|.|.|.|||||....|
  Rat   308 TAVGPLLARRKRSTGAASSHCQKTSLRVNFEDIGWDSWIIAPKEYDAYECKGGCFFPLADDVTPT 372

  Fly   532 NHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQSTVVLK-NYQEMTVVGCGCR 588
            .||:|||||:...|.||.|||||||:|..:::||.:|.....|| :|:.|:|..||||
  Rat   373 KHAIVQTLVHLKFPTKVGKACCVPTKLSPISILYKDDMGVPTLKYHYEGMSVAECGCR 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:480997 59/255 (23%)
TGF_beta_DPP 480..588 CDD:381662 56/112 (50%)
Gdf2NP_001099566.1 TGFb_propeptide 69..215 CDD:480997 47/171 (27%)
TGF_beta_BMP9 326..430 CDD:381670 54/103 (52%)

Return to query results.
Submit another query.