DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Cers1

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001037695.1 Gene:Cers1 / 290658 RGDID:1305974 Length:350 Species:Rattus norvegicus


Alignment Length:85 Identity:21/85 - (24%)
Similarity:32/85 - (37%) Gaps:19/85 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   499 VGWDDWIVAPLGYDAYYCHGKCPFPLADHFNS------TNHAVVQTLVNNMNPGKVPKACCVPTQ 557
            |.| |..||.|...::|||........|.:..      .:|.|...|:          |.....:
  Rat   144 VPW-DIAVAYLLQGSFYCHSVYATVYMDSWRKDSVVMLVHHVVTLLLI----------ASSYAFR 197

  Fly   558 LDSVAML--YLNDQSTVVLK 575
            ..:|.:|  :|:|.|.|.|:
  Rat   198 YHNVGLLVFFLHDVSDVQLE 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078
TGFB 487..588 CDD:214556 21/85 (25%)
Cers1NP_001037695.1 TRAM_LAG1_CLN8 98..303 CDD:281751 21/85 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11848
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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