DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and GDF9

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_005251.1 Gene:GDF9 / 2661 HGNCID:4224 Length:454 Species:Homo sapiens


Alignment Length:493 Identity:108/493 - (21%)
Similarity:177/493 - (35%) Gaps:131/493 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 QASASTESHQSSSIESIFVEEPTLVLDREVASINVPANAKAIIAEQGPSTYSKEALIKDKLKPDP 220
            |.:||.|....:...|:...    :.:|:.|.: :||..|.:...:|.|         .:|:||.
Human    33 QIAASAELESGAMPWSLLQH----IDERDRAGL-LPALFKVLSVGRGGS---------PRLQPDS 83

  Fly   221 STLVEIEKSLLSLFNMKRPPKIDRSKI-----------------------IIPEPMKKLY----A 258
            ..|..::|...:....:..||.:||.:                       |:|. ::.|:    .
Human    84 RALHYMKKLYKTYATKEGIPKSNRSHLYNTVRLFTPCTRHKQAPGDQVTGILPS-VELLFNLDRI 147

  Fly   259 EIMGHELDSV---NIPKPGLLTKSANTVRSFTHKDSKIDD----RFPHHHRFRLHFDVKSIPADE 316
            ..:.|.|.||   ||......:.:...|.:...|:.|...    |.|:...|...|:.     .:
Human   148 TTVEHLLKSVLLYNINNSVSFSSAVKCVCNLMIKEPKSSSRTLGRAPYSFTFNSQFEF-----GK 207

  Fly   317 KLKAAELQLTRDALSQQVVASRS-----SANRT---------RYQVLVYDITRVGVRGQREPSYL 367
            |.|..::.:|  :|.|.:|||..     |.|.|         ..|..::::|.|      .||.:
Human   208 KHKWIQIDVT--SLLQPLVASNKRSIHMSINFTCMKDQLEHPSAQNGLFNMTLV------SPSLI 264

  Fly   368 LLDTKTVRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPHHHVRLRRSADEAHE 432
            |.      ||.|..      .|...|       |.|                |.:.|.|.....|
Human   265 LY------LNDTSA------QAYHSW-------YSL----------------HYKRRPSQGPDQE 294

  Fly   433 RWQHKQPLLFTYTDDGR---HKARSIRDVSGGEGGGKGGRNKRQPRRPTRRKNHD---------D 485
            |.....|:.....:|||   |:.|..::....|        .::|..|......:         :
Human   295 RSLSAYPVGEEAAEDGRSSHHRHRRGQETVSSE--------LKKPLGPASFNLSEYFRQFLLPQN 351

  Fly   486 TCRRHSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPK 550
            .|..|...:.||.:.||:|||||..|:..||.|.||..:...:.|..|.:||.::.......||:
Human   352 ECELHDFRLSFSQLKWDNWIVAPHRYNPRYCKGDCPRAVGHRYGSPVHTMVQNIIYEKLDSSVPR 416

  Fly   551 ACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGCR 588
            ..|||.:...:::|.:....::..|.|::|....|.||
Human   417 PSCVPAKYSPLSVLTIEPDGSIAYKEYEDMIATKCTCR 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 51/266 (19%)
TGFB 487..588 CDD:214556 31/100 (31%)
GDF9NP_005251.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..330 6/34 (18%)
TGF_beta 353..453 CDD:306518 31/99 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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