DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and GDF1

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001374367.1 Gene:GDF1 / 2657 HGNCID:4214 Length:372 Species:Homo sapiens


Alignment Length:408 Identity:104/408 - (25%)
Similarity:171/408 - (41%) Gaps:90/408 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 GPSTYSKEAL-IKD------KLKPDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPEP---MKKL 256
            ||:....:|| ::|      :|:|.|..:..:.:        :|.|:..||......|   ::..
Human    34 GPAAALLQALGLRDEPQGAPRLRPVPPVMWRLFR--------RRDPQETRSGSRRTSPGVTLQPC 90

  Fly   257 YAEIMGHELDSV-NIPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKSIPADEKLKA 320
            :.|.:|...:.| :||..|..|:::....:..|..           .:.:.||:.::...|:...
Human    91 HVEELGVAGNIVRHIPDRGAPTRASEPASAAGHCP-----------EWTVVFDLSAVEPAERPSR 144

  Fly   321 AELQLTRDALSQQVVASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDTVSLD 385
            |.|:|       :..|:.::|....:::   .:.:.|.....:|..:||......|.        
Human   145 ARLEL-------RFAAAAAAAPEGGWEL---SVAQAGQGAGADPGPVLLRQLVPALG-------- 191

  Fly   386 VQPAVDRWL--ASPQRNYGLLVEVRTVRSLKP-APHHHVRLRRSADEAHERWQHKQPLLFTYTDD 447
              |.|...|  |:..||......:|...:|:| ||....||..::             |...|.|
Human   192 --PPVRAELLGAAWARNASWPRSLRLALALRPRAPAACARLAEAS-------------LLLVTLD 241

  Fly   448 GR--HK-ARSIRDVSGGEGGGKGGRNKRQPRRPTRRKNHDDTCRRHSLYVDFSDVGWDDWIVAPL 509
            .|  |. ||..||.....|||.||                 .||...|||.|.:|||..|::||.
Human   242 PRLCHPLARPRRDAEPVLGGGPGG-----------------ACRARRLYVSFREVGWHRWVIAPR 289

  Fly   510 GYDAYYCHGKCPFPLADHFN----STNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQS 570
            |:.|.||.|:|..|:|...:    :.||||::.|::...||.....||||.:|..:::|:.::..
Human   290 GFLANYCQGQCALPVALSGSGGPPALNHAVLRALMHAAAPGAADLPCCVPARLSPISVLFFDNSD 354

  Fly   571 TVVLKNYQEMTVVGCGCR 588
            .|||:.|::|.|..||||
Human   355 NVVLRQYEDMVVDECGCR 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 40/225 (18%)
TGFB 487..588 CDD:214556 41/104 (39%)
GDF1NP_001374367.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 67..86 5/26 (19%)
TGF_beta_GDF1_3_like 267..372 CDD:381642 41/104 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
32.770

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