DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Amh

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_037034.1 Gene:Amh / 25378 RGDID:2108 Length:553 Species:Rattus norvegicus


Alignment Length:363 Identity:86/363 - (23%)
Similarity:130/363 - (35%) Gaps:108/363 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 ELDSVNIPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKSIPADEKL----KAAELQ 324
            :||:|..|:|||         |...:|      .||          .:.|..|.|    :|....
  Rat   261 QLDTVPFPQPGL---------SLEPED------LPH----------SADPFLETLTRLVRALRGP 300

  Fly   325 LTRDALSQQVVASRSSANRTRYQVLVYDITRVG--VRGQREPSYLLLDT------KTVRLNSTDT 381
            |||.:.::..:...:.|:..:..|.:.|...:|  :.|: ||..|||..      :.:||:|   
  Rat   301 LTRASNTRLALDPGALASFPQGLVNLSDPVALGRLLDGE-EPLLLLLSPAAATVGEPMRLHS--- 361

  Fly   382 VSLDVQPAVDRWLASPQRNYGLLV-----EVRTVRSLKP-APHHHVRLRRSADEAHERWQHKQPL 440
                  |....|.|...|...:.:     |:|.:..|.| ||....|                 |
  Rat   362 ------PTSAPWAAGLARRVAVELQAAASELRDLPGLPPTAPPLLSR-----------------L 403

  Fly   441 LFTYTDDGRHKARSIR-------------DVSGGEGGGKGGRNKRQPRRPTRRKNHDDTCRRHSL 492
            |....:|.|.....:|             :..|.||.|:.||:|        ....|..|....|
  Rat   404 LALCPNDSRSAGDP
LRALLLLKALQGLRAEWRGREGRGRAGRSK--------GTGTDGLCALREL 460

  Fly   493 YVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNST--NHAVVQTLVNNMNP-----GKVPK 550
            .||...   :..::.|..|.|..|.|.|.:|.:|. |..  ||.|   |:..|..     |::| 
  Rat   461 SVDLRA---ERSVLIPETYQANNCQGACAWPQSDR-NPRYGNHVV---LLLKMQARGAALGRLP- 517

  Fly   551 ACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGCR 588
             |||||......::.|:::. :...:...|....||||
  Rat   518 -CCVPTAYTGKLLISLSEEH-ISAHHVPNMVATECGCR 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 44/197 (22%)
TGFB 487..588 CDD:214556 29/107 (27%)
AmhNP_037034.1 AMH_N 74..417 CDD:282552 46/207 (22%)
TGFB 455..553 CDD:214556 29/107 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.