DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Nodal

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_038639.2 Gene:Nodal / 18119 MGIID:97359 Length:354 Species:Mus musculus


Alignment Length:396 Identity:98/396 - (24%)
Similarity:153/396 - (38%) Gaps:139/396 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   250 PEP---MKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKS 311
            |.|   |..||.:           |.|     .|:.:||...:|..:..:     .:...||...
Mouse    39 PSPLAYMLSLYRD-----------PLP-----RADIIRSLQAQDVDVTGQ-----NWTFTFDFSF 82

  Fly   312 IPADEKLKAAELQ--------------LTRDALSQQVVASRSSANRTRYQVLVYDITRVGVRG-- 360
            :..:|.|..|||:              ||.|...|                         .:|  
Mouse    83 LSQEEDLVWAELRLQLPGPMDIPTEGPLTIDIFHQ-------------------------AKGDP 122

  Fly   361 QREPSYLL----LDTKT-----VRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPA 416
            :|:|:..|    ::|.|     |...|..|| |:|...:.:||..|             |:|:  
Mouse   123 ERDPADCLERIWMETFTVIPSQVTFASGSTV-LEVTKPLSKWLKDP-------------RALE-- 171

  Fly   417 PHHHVRLRRSADEAHERWQHKQP-----------LLFTYTDDGRHKARSIRDVSGG--------- 461
                   ::.:..|.:.|.  ||           :|..|:    ::.:..|.:.|.         
Mouse   172 -------KQVSSRAEKCWH--QPYTPPVPVASTNVLMLYS----NRPQEQRQLGGATLLWEAESS 223

  Fly   462 ----------EGGGKGGRNKRQPRRPTRRKNHDDTCRRHSLYVDFSDVGWDDWIVAPLGYDAYYC 516
                      |.|| .||.:|:...|.|    ...|||....|||:.:||..||:.|..|:||.|
Mouse   224 WRAQEGQLSVERGG-WGRRQRRHHLPDR----SQLCRRVKFQVDFNLIGWGSWIIYPKQYNAYRC 283

  Fly   517 HGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQSTVVLKNYQEMT 581
            .|:||.|:.:.|:.||||.:|:|:....|.:||..||.|.:...::|||: |...|:|:::::|.
Mouse   284 EGECPNPVGEEFHPTNHAYIQSLLKRYQPHRVPSTCCAPVKTKPLSMLYV-DNGRVLLEHHKDMI 347

  Fly   582 VVGCGC 587
            |..|||
Mouse   348 VEECGC 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 44/232 (19%)
TGFB 487..588 CDD:214556 43/101 (43%)
NodalNP_038639.2 TGFb_propeptide 33..169 CDD:279078 37/189 (20%)
TGFB 254..353 CDD:214556 41/99 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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