DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Gdf5

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_032135.2 Gene:Gdf5 / 14563 MGIID:95688 Length:495 Species:Mus musculus


Alignment Length:633 Identity:163/633 - (25%)
Similarity:245/633 - (38%) Gaps:199/633 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AWLLLLAVLATFQTIVRVASTEDISQRFIAA-----------IAPVAAHIPLASASGSGSGRSGS 56
            |||.|       :.|..|....|:.||...|           ..|:|.::........|.|.:.:
Mouse    15 AWLDL-------ELICTVLGAPDLGQRTPGAKPGLTKAEAKERPPLARNVFRPGGHIYGVGATNA 72

  Fly    57 RSVGASTSTALAKAFNPFSEPASFSDSDKSHRSKTNKKPSKSDANRQFNEVHKPRTDQLENSKNK 121
            |:.|:|..|...|     .||              .|.|.:|..         |.|         
Mouse    73 RAKGSSGQTQAKK-----DEP--------------RKMPPRSGG---------PET--------- 100

  Fly   122 SKQLVNKPNHNKMAVKEQRSHHKKSHHHRSHQPKQASASTESHQSSSIESIFVEEPTLVLDREVA 186
                  ||.                   .|.|.:||:|.|.:.:.                    
Mouse   101 ------KPG-------------------PSSQTRQAAARTVTPKG-------------------- 120

  Fly   187 SINVPANAKAIIAEQGPSTYSKEALIKDKLKPDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPE 251
              .:|....:..|...||::    |:| |.: :|.|..|.::..       |||.|...     |
Mouse   121 --QLPGGKASSKAGSAPSSF----LLK-KTR-EPGTPREPKEPF-------RPPPITPH-----E 165

  Fly   252 PMKKLYAEIMGHEL----DSVNIPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKSI 312
            .|..||..:...:.    .||.: :.||    |||:.||..|..  |||.|...:.|..||:.::
Mouse   166 YMLSLYRTLSDADRKGGNSSVKL-EAGL----ANTITSFIDKGQ--DDRGPAVRKQRYVFDISAL 223

  Fly   313 PADEKLKAAELQLTR----DALSQQVVAS-------RSSANRTRYQVLVYDITRV-GVRGQREPS 365
            ..| .|..|||::.|    |.....|.:|       .||....|....:.|:..| |:.|.   .
Mouse   224 EKD-GLLGAELRILRKKPLDVAKPAVPSSGRVAQLKLSSCPSGRQPAALLDVRSVPGLDGS---G 284

  Fly   366 YLLLDTKTVRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPHHHVRLRRSADEA 430
            :.:.|...:..|..::..|.::  ::.|      ..|..|::|           .:...|:|.:.
Mouse   285 WEVFDIWKLFRNFKNSAQLCLE--LEAW------ERGRAVDLR-----------GLGFERTARQV 330

  Fly   431 HERWQHKQPLLFTYTDDGRHKARSIRDVSGGEGGGKGGRN--------------------KRQPR 475
            ||:     .|...:   ||.|.   ||:...|...:.|::                    .||.:
Mouse   331 HEK-----ALFLVF---GRTKK---RDLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLANRQGK 384

  Fly   476 RPTRRKNHDDTCRRHSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLV 540
            ||:  ||....|.|.:|:|:|.|:||||||:|||.|:|::|.|.|.|||..|...|||||:|||:
Mouse   385 RPS--KNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLM 447

  Fly   541 NNMNPGKVPKACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGCR 588
            |:|:|...|..|||||:|..:::|:::..:.||.|.|::|.|..||||
Mouse   448 NSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 54/234 (23%)
TGFB 487..588 CDD:214556 51/100 (51%)
Gdf5NP_032135.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..162 41/228 (18%)
TGFb_propeptide 139..338 CDD:279078 59/247 (24%)
TGFB 394..495 CDD:214556 51/100 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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