DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Gdf10

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_665684.2 Gene:Gdf10 / 14560 MGIID:95684 Length:476 Species:Mus musculus


Alignment Length:422 Identity:102/422 - (24%)
Similarity:170/422 - (40%) Gaps:115/422 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 STLVEIEKSLLSLFNM-KRPPKIDRSKIIIPEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVR 284
            :::.:.|..|.:.|:. ..||:..|::.:..:|..|         ..|..:..|||..       
Mouse   116 TSMQDSEMILTAAFHFYSEPPRWPRAREVFCKPRAK---------NASCRLLTPGLPA------- 164

  Fly   285 SFTHKDSKIDDRFPHHHRFRLHFDVKSI---PADEKLKAAELQLT---RDALSQQVVASRSSANR 343
                               |||...:|:   .|.:.|....:.||   |.....:.::|...|.|
Mouse   165 -------------------RLHLIFRSLSQNTATQGLLRGAMALTPPPRGLWQAKDISSIIKAAR 210

  Fly   344 TRYQVLVYDITRVGVR--GQREPS----YLLLDTKTVRLNSTDTVSLDVQ-----PAVD-RWLAS 396
            ...::|:......|.:  |...||    |:|:....:.::..::|::.:|     ||.| ...|:
Mouse   211 RDGELLLSAQLDTGEKDPGVPRPSSHMPYILVYANDLAISEPNSVAVSLQRYDPFPAGDFEPGAA 275

  Fly   397 PQRNYGLLVEVRTVRSL--------------KPAPHHHVRLRRSADEAHERWQHKQPLLFTYTDD 447
            |  |......||....:              :|||..|.:    ....||.|......|      
Mouse   276 P--NSSADPRVRRAAQVSKPLQDNELPGLDERPAPALHAQ----NFHKHEFWSSPFRAL------ 328

  Fly   448 GRHKARSIRDVSGGEGGGKGGRNKR-----------------QPRRPTRRKNHDD--TCRRHSLY 493
               |.|:          |:..|.|:                 :..:..||:..|:  .|.|..|.
Mouse   329 ---KPRT----------GRKDRKKKDQDTFTAASSQVLDFDEKTMQKARRRQWDEPRVCSRRYLK 380

  Fly   494 VDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMN--PGKVPKACCVPT 556
            |||:|:||::||::|..:|||||.|.|.||:......:|||.:|::|..:.  || :|:.||||.
Mouse   381 VDFADIGWNEWIISPKSFDAYYCAGACEFPMPKIVRPSNHATIQSIVRAVGIVPG-IPEPCCVPD 444

  Fly   557 QLDSVAMLYLNDQSTVVLKNYQEMTVVGCGCR 588
            :::|:.:|:|::....|||.|..|:|..|.||
Mouse   445 KMNSLGVLFLDENRNAVLKVYPNMSVETCACR 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 49/251 (20%)
TGFB 487..588 CDD:214556 43/102 (42%)
Gdf10NP_665684.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..63
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 268..301 6/34 (18%)
TGF_beta 372..475 CDD:278448 43/103 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.