DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Bmp4

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_001303289.1 Gene:Bmp4 / 12159 MGIID:88180 Length:408 Species:Mus musculus


Alignment Length:412 Identity:165/412 - (40%)
Similarity:229/412 - (55%) Gaps:43/412 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 VPANAKAIIAE-QGPSTYSKEALIKDKLKPDPSTLVEIEKSLLSLFNMKRPPKIDRSKIIIPEPM 253
            :|...|..:|| ||.:...:.....:.|:       :.|.:||.:|.::|.|:..:| .:||:.|
Mouse    27 IPETGKKKVAEIQGHAGGRRSGQSHELLR-------DFEATLLQMFGLRRRPQPSKS-AVIPDYM 83

  Fly   254 KKLYAEIMGHELD-----SVNIPKPGLLTKSANTVRSFTHKDSKIDDRFP---HHHRFRLHFDVK 310
            :.||....|.|.:     ...:..|......|||||||.|::..  :..|   ....||..|::.
Mouse    84 RDLYRLQSGEEEEEEQSQGTGLEYPERPASRANTVRSFHHEEHL--ENIPGTSESSAFRFLFNLS 146

  Fly   311 SIPADEKLKAAELQLTRDALSQQVVASRSSANRTRYQVLVYDITRVGVRGQREPSYL---LLDTK 372
            |||.:|.:.:|||:|.|:.:.|     .....:..:::.:|::.:  ...:..|.:|   ||||:
Mouse   147 SIPENEVISSAELRLFREQVDQ-----GPDWEQGFHRINIYEVMK--PPAEMVPGHLITRLLDTR 204

  Fly   373 TVRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPHHHVRLRRSADEAHERWQHK 437
            .|..|.|...:.||.|||.||....|.||||.:||..:...:.....|||:.||..:....|...
Mouse   205 LVHHNVTRWETFDVSPAVLRWTREKQPNYGLAIEVTHLHQTRTHQGQHVRISRSLPQGSGDWAQL 269

  Fly   438 QPLLFTYTDDGRHKARSIRDVSGGEGGGKGGRNKRQPR-RPTRRKNHDDTCRRHSLYVDFSDVGW 501
            :|||.|:..|||....:.|            |.||.|: .|.|.:..:..|||||||||||||||
Mouse   270 RPLLVTFGHDGRGHTLTRR------------RAKRSPKHHPQRSRKKNKNCRRHSLYVDFSDVGW 322

  Fly   502 DDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYL 566
            :||||||.||.|:||||.||||||||.||||||:||||||::| ..:||||||||:|.:::||||
Mouse   323 NDWIVAPPGYQAFYCHGDCPFPLADHLNSTNHAIVQTLVNSVN-SSIPKACCVPTELSAISMLYL 386

  Fly   567 NDQSTVVLKNYQEMTVVGCGCR 588
            ::...|||||||||.|.|||||
Mouse   387 DEYDKVVLKNYQEMVVEGCGCR 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 70/229 (31%)
TGFB 487..588 CDD:214556 75/100 (75%)
Bmp4NP_001303289.1 TGFb_propeptide 41..276 CDD:279078 71/251 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..111 3/19 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..307 8/37 (22%)
TGFB 308..408 CDD:214556 75/100 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 176 1.000 Domainoid score I3592
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 277 1.000 Inparanoid score I2913
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002405
OrthoInspector 1 1.000 - - otm42857
orthoMCL 1 0.900 - - OOG6_105711
Panther 1 1.100 - - O PTHR11848
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3241
SonicParanoid 1 1.000 - - X157
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.890

Return to query results.
Submit another query.