DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and Amh

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_031471.2 Gene:Amh / 11705 MGIID:88006 Length:554 Species:Mus musculus


Alignment Length:444 Identity:100/444 - (22%)
Similarity:155/444 - (34%) Gaps:123/444 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 VASINVPANA---KAIIAEQGPS----TYSKEALIKDKLKPDPSTLVEIEKSLLSLFNMKRPPKI 242
            |.:::.||.|   ..:|....||    |.|.:.|.......|......:..:|:.|      |..
Mouse   194 VLTVDFPAGAWSGSGLILTLQPSREGATLSIDQLQAFLFGSDSRCFTRMTPTLVVL------PPA 252

  Fly   243 DRSKIIIPEPMKKLYAEIMGH-ELDSVNIPKPGLLTKSANTVRSFTHKDSKIDDRFPHHHRFRLH 306
            :.|    |:|         .| :||::..|:|||               |...:..||       
Mouse   253 EPS----PQP---------AHGQLDTMPFPQPGL---------------SLEPEALPH------- 282

  Fly   307 FDVKSIPADEKL----KAAELQLTRDALSQQVVASRSSANRTRYQVLVYDITRVG-VRGQREPSY 366
               .:.|..|.|    :|....||:.:.:|..:...:.|:..:..|.:.|...:| :....||..
Mouse   283 ---SADPFLETLTRLVRALRGPLTQASNTQLALDPGALASFPQGLVNLSDPAALGRLLDWEEPLL 344

  Fly   367 LLLDTKTVRLNSTDTVSLDVQ-PAVDRWLASPQRNYGLLV-----EVRTVRSLKP-APHHHVRLR 424
            |||....    :|:...:.:. ||...|.|..||...:.:     |:|.:..|.| ||....|  
Mouse   345 LLLSPAA----ATEREPMPLHGPASAPWAAGLQRRVAVELQAAASELRDLPGLPPTAPPLLAR-- 403

  Fly   425 RSADEAHERWQHKQPLLFTYTDDGRHKARSIR-------------DVSGGEGGGKGGRNKRQPRR 476
                           ||....:|.|.....:|             :..|.||.|:.||       
Mouse   404 ---------------LLALCPNDSRSSGDPLRALLLLKALQGLRAEWHGREGRGRTGR------- 446

  Fly   477 PTRRKNHDDTCRRHSLYVDFSDVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNST--NHAVVQTL 539
             :.....|..|....|.||...   :..::.|..|.|..|.|.|.:|.:|. |..  ||.|   |
Mouse   447 -SAGTGTDGPCALRELSVDLRA---ERSVLIPETYQANNCQGACAWPQSDR-NPRYGNHVV---L 503

  Fly   540 VNNMNP-----GKVPKACCVPTQLDSVAMLYLNDQSTVVLKNYQEMTVVGCGCR 588
            :..|..     |::|  |||||......::.|::: .:...:...|....||||
Mouse   504 LLKMQARGAALGRLP--CCVPTAYAGKLLISLSEE-RISAHHVPNMVATECGCR 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 48/231 (21%)
TGFB 487..588 CDD:214556 29/107 (27%)
AmhNP_031471.2 AMH_N 76..396 CDD:282552 53/249 (21%)
TGFB 456..554 CDD:214556 29/107 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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