DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dpp and LEFTY1

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:NP_066277.1 Gene:LEFTY1 / 10637 HGNCID:6552 Length:366 Species:Homo sapiens


Alignment Length:407 Identity:90/407 - (22%)
Similarity:143/407 - (35%) Gaps:131/407 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 SLLSLFNMKRPPKIDRS---KIIIPEPMKKLYAEIMGHELDSVNIPKPGLLTKSANTVRSFTHKD 290
            |||....:|..|.:||:   :::||..::..|.               .||.:|        |.|
Human    30 SLLRQLQLKEVPTLDRADMEELVIPTHVRAQYV---------------ALLQRS--------HGD 71

  Fly   291 SKIDDRFPHHHR-------------FRLHFDVKS-IPADEKLKAAELQLTRDALSQQVV--ASRS 339
            .....||....|             ..|.|.::. :|.:.:|..|.|:|.::.:.:..:  ..|.
Human    72 RSRGKRFSQSFREVAGRFLALEASTHLLVFGMEQRLPPNSELVQAVLRLFQEPVPKAALHRHGRL 136

  Fly   340 SANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDTVSLDVQPAVDRWLASPQRNYGLL 404
            |....|.:|.| :..||...|....|  |:|::.|.::.:...:.||..||:.|....:....||
Human   137 SPRSARARVTV-EWLRVRDDGSNRTS--LIDSRLVSVHESGWKAFDVTEAVNFWQQLSRPRQPLL 198

  Fly   405 VEVRTVRSLKPAPHHHVRLRRSADEAHERWQHKQPLLFTYTDDGRHKARSIRDVSGG-------- 461
            ::|...|                       :|..||.     .|.||.  :|..|.|        
Human   199 LQVSVQR-----------------------EHLGPLA-----SGAHKL--VRFASQGAPAGLGEP 233

  Fly   462 -------EGGGKGGRNKRQPRRP----TRRKNHDDTCRRHSLYVDFSDVGW-DDWIVAPLGYDAY 514
                   :.|..|.:....|..|    ||       |.|..:|:|...:.| ::|::.|.|:.||
Human   234 QLELHTLDLGDYGAQGDCDPEAPMTEGTR-------CCRQEMYIDLQGMKWAENWVLEPPGFLAY 291

  Fly   515 YCHGKC---PFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVAMLYLNDQ------S 570
            .|.|.|   |..||..:                |...|:. |:.::.||:.|:....:      .
Human   292 ECVGTCRQPPEALAFKW----------------PFLGPRQ-CIASETDSLPMIVSIKEGGRTRPQ 339

  Fly   571 TVVLKNYQEMTVVGCGC 587
            .|.|.|   |.|..|.|
Human   340 VVSLPN---MRVQKCSC 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 49/233 (21%)
TGFB 487..588 CDD:214556 29/111 (26%)
LEFTY1NP_066277.1 TGFb_propeptide <106..214 CDD:307025 29/138 (21%)
TGF_beta 263..353 CDD:306518 28/109 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3900
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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