DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpp and tgfb1

DIOPT Version :9

Sequence 1:NP_477311.1 Gene:dpp / 33432 FlyBaseID:FBgn0000490 Length:588 Species:Drosophila melanogaster
Sequence 2:XP_002939433.1 Gene:tgfb1 / 100498430 XenbaseID:XB-GENE-488111 Length:381 Species:Xenopus tropicalis


Alignment Length:415 Identity:100/415 - (24%)
Similarity:141/415 - (33%) Gaps:128/415 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 IEKSLLSLFNMKRPPKIDRSKIIIPEPMKKLYAEIMG---------------------------H 263
            |...:||...:.|.|.:|...:.:|.....||...:.                           |
 Frog    41 IRGQILSKLKLDRTPDVDSENMTVPSEAISLYNSTLEVIRERAAKEEAPVWQEHNIQDYYAKQVH 105

  Fly   264 ELDSVNIPKPG--LLTKSANTVRSFTHKDSKIDDRFPHHHRFRLHFDVKSIPADEKLKAAELQLT 326
            ..:|:|..|..  |.|.:|:.||......|.:      ||                   |||::.
 Frog   106 RFESINELKENEFLFTFNASHVRENVGMKSLL------HH-------------------AELRMY 145

  Fly   327 RDALSQQVVASRS---SANRTRYQVLVYDITRVGVRGQREPSYLLLDTK-TVRLNSTDTVSLDVQ 387
            |...:.:.|..|.   :.|.|.|.                 .|  ||:| ...:...:.||.||.
 Frog   146 RKKQTDKNVEQRMELYAGNGTDYS-----------------GY--LDSKFFTAVTDDEWVSFDVT 191

  Fly   388 PAVDRWLASPQRNYGLLVEVRTVRSLKPA------PHHHV------------RLRRSADEAHERW 434
            ..|:.||...:.|    .|.|    ||||      .|..|            .:....|:.    
 Frog   192 KTVNEWLNHAEEN----EEFR----LKPACKCSITTHSKVISIEGFSILRGDLMNLGGDDL---- 244

  Fly   435 QHKQP-LLFTYTDDGRHKARSIRDVSGGEGGGKGGRNKRQPRRPTRRKNHDDTCRRHSLYVDF-S 497
              |:| ||.|     ...|..|..||       ..|.||...:.....|....|....||::| .
 Frog   245 --KKPYLL
IT-----SMPAERIDTVS-------HSRRKRGVGQEYCFGNSGPNCCVKPLYINFRK 295

  Fly   498 DVGWDDWIVAPLGYDAYYCHGKCPFPLADHFNSTNHAVVQTLVNNMNPGKVPKACCVPTQLDSVA 562
            |:|| .||..|.||:|.||.|.||:..:   ..|.::.|.:|.|..|||.....||||..|:.:.
 Frog   296 DLGW-KWIHEPKGYEANYCLGNCPYIWS---TDTQYSKVLSLYNQNNPGASISPCCVPDVLEPLP 356

  Fly   563 MLYLNDQSTVVLKNYQEMTVVGCGC 587
            ::|...::..| :....|.|..|.|
 Frog   357 IIYYVGRNAKV-EQLSNMVVRSCHC 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dppNP_477311.1 TGFb_propeptide 225..444 CDD:279078 55/269 (20%)
TGFB 487..588 CDD:214556 36/102 (35%)
tgfb1XP_002939433.1 TGFb_propeptide 22..250 CDD:366248 53/266 (20%)
TGF_beta_TGFB1 283..381 CDD:381654 36/103 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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